BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15271 (UTR included)
(7322 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A1D05 1461 0.0
BF01009B1C07 1328 0.0
>BF01029A1D05
Length = 769
Score = 1461 bits (737), Expect = 0.0
Identities = 752/757 (99%)
Strand = Plus / Plus
Query: 4197 ccgtcatggcttgaactgcaagctacaaaatctaaaaaacctataatgttaccaataacg 4256
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ccgtcatggctggaactgcaagctacaaaatctaaaaaacctataatgttaccaataacg 72
Query: 4257 ttcatggacggtaatactaagacattgttagccgattcggcgaccaccgccagggagcta 4316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ttcatggacggtaatactaagacattgttagccgattcggcgaccaccgccagggagcta 132
Query: 4317 tgtaatcagctgtcagataaaattggtttaagagatcaatttggcttttcgttgtatata 4376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tgtaatcagctgtcagataaaattggtttaagagatcaatttggcttttcgttgtatata 192
Query: 4377 gcactgtttgataaagtcagttctctcggtagcggcggcgatcacgttatggacgctata 4436
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gcattgtttgataaagtcagttctctcggtagcggcggcgatcacgttatggacgctata 252
Query: 4437 tcccaatgtgagcaatatgccaaagaacaaggtgcccaagaacggaatgcaccttggaga 4496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tcccaatgtgagcaatatgccaaagaacaaggtgcccaagaacggaatgcaccttggaga 312
Query: 4497 ttattctttagaaaggaaatattcgcaccgtggcacgatccaacggaagatcaggtagcg 4556
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 313 ttattctttagaaaggaaatattcgcaccgtggcacgatcctacggaagatcaggtagcg 372
Query: 4557 actaatctgatatatcaacaagtagtccgaggagtcaagtttggtgagtatcgatgcgac 4616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 actaatctgatatatcaacaagtagtccgaggagtcaagtttggtgagtatcgatgcgac 432
Query: 4617 aaagaggaggacctggcaatgatcgccgcgcagcaatactatattgagtacggtcaggat 4676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaagaggaggacctggcaatgatcgccgcgcagcaatactatattgagtacggtcaggat 492
Query: 4677 atgaacgcagaacgtttatatacattgttaccgaactatatacccgattattgcttgacg 4736
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atgaacgcggaacgtttatatacattgttaccgaactatatacccgattattgcttgacg 552
Query: 4737 ggagtcgagaaagcagtcgaccgatggggcgctcttgtagtgcaagcttataaaaagagt 4796
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggagttgagaaagcagtcgaccgatggggcgctcttgtagtgcaagcttataaaaagagt 612
Query: 4797 tattatgtcaaagaaaaaatagcggcctataaagtgaaagaggatgtagttagttatgcg 4856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tattatgtcaaagaaaaaatagcggcctataaagtgaaagaggatgtagttagttatgcg 672
Query: 4857 aagttcaaatggcctttactcttttctcgattttatgaggcgtatagaaactcaggacca 4916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aagttcaaatggcctttactcttttctcgattttatgaggcgtatagaaactcaggacca 732
Query: 4917 aatttgccaaagaacgatgtaattatagcggttaatt 4953
|||||||||||||||||||||||||||||||||||||
Sbjct: 733 aatttgccaaagaacgatgtaattatagcggttaatt 769
>BF01009B1C07
Length = 682
Score = 1328 bits (670), Expect = 0.0
Identities = 679/682 (99%)
Strand = Plus / Plus
Query: 5292 aacggatggtgcatcggtcgttgtgaacggagtatggagagaggtgactttcctgctgaa 5351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacggatggtgcatcggtcgttgtgaacggagtatggagagaggtgactttcctgctgaa 60
Query: 5352 actgtatacgttcttccagcattaagtaagccgccaccagatatattggcattgttctgt 5411
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgtatacgttcttccggcattaagtaagccgccaccagatatattggcattgttctgt 120
Query: 5412 caagaaggtgctcaacatggcaggcgtgcacctaccagcacgtttaatggaacagaaaca 5471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagaaggtgctcaacatggcaggcgtgcacctaccagcacgtttaatggaacagaaaca 180
Query: 5472 agagacaaacctcatacccttgttgaatatgcaatggatcatttcagattaccgccaaag 5531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagacaaacctcatacccttgttgaatatgcaatggatcatttcagattaccgccaaag 240
Query: 5532 cgtaccacttctaaagctctaacactttccactgctaaaagaggagccgaagaattgtgg 5591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtaccacttctaaagctctaacactttccactgctaaaagaggagccgaagaattgtgg 300
Query: 5592 cgacattctagagaaccaataaaacagcccttattgaagaagttgcaagccaaagaggag 5651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgacattctagagaaccaataaaacagcccttattgaagaagttgcaagccaaagaggag 360
Query: 5652 ctagctgaagaagcttgctttgcgttcacggccttactaaaatacatgggggaccttcct 5711
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 361 ctagctgaagaagcttgctttgcgttcacggccttactaaaatacatgggggatcttcct 420
Query: 5712 tccaaacgtccacgtctaggtaatgaatatacggaccatatttttgatggccctctcaaa 5771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tccaaacgtccacgtctaggtaatgaatatacggaccatatttttgatggccctctcaaa 480
Query: 5772 catgaaattttaagagatgaaatctattgtcaacttatgaaacagttaacagacaacaga 5831
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 catgaaattttaagagatgaaatctattgtcaacttatgaaacagttaacagaaaacaga 540
Query: 5832 aacagaatgtcggaagaaagaggttgggaattaatgtggctagctacagggttgtttgcg 5891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacagaatgtcggaagaaagaggttgggaattaatgtggctagctacagggttgtttgcg 600
Query: 5892 tgtagtcagggcctccttagagaattaactttattccttagaactagacgatatccaatc 5951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtagtcagggcctccttagagaattaactttattccttagaactagacgatatccaatc 660
Query: 5952 gcacaggattcactccaaagac 5973
||||||||||||||||||||||
Sbjct: 661 gcacaggattcactccaaagac 682
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 124,844
Number of extensions: 13939
Number of successful extensions: 13939
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 13939
Number of HSP's successfully gapped: 2
Length of query: 7322
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7304
Effective length of database: 8,109,745
Effective search space: 59233577480
Effective search space used: 59233577480
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)