BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13363 (UTR included)
(2352 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3220_C1 1104 0.0
BF01059A2D04 287 4e-77
>BF14_3220_C1
Length = 834
Score = 1104 bits (557), Expect = 0.0
Identities = 594/610 (97%)
Strand = Plus / Plus
Query: 1743 ggcgtccccatacaccccgacacgccagtcgacgagctggacggggccagggttcagata 1802
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggcgtccccatacaccccgacacgccagtcgaccntctggacggggccagggttcagata 60
Query: 1803 ctagaagacgacacgaccagcacgccgcccgtgacgatcacccgcgacgaggacggagac 1862
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggaagacgacacgaccagcacgccgcccgtgacgatcacccgcgacgaggacggagac 120
Query: 1863 tcgctcagcgacctggctctccgccccgacgacctcgacgacaaccagagtacaagtcga 1922
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 tcgctcagcgacctggctctccgccccgatgacctcgacgacaaccagagtacaagtcga 180
Query: 1923 agtagcgtcagttctaaccagactgtggacgtgacttcccttgtgaacacgtccggtgtg 1982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtagcgtcagttctaaccagactgtggacgtgacttcccttgtgaacacgtccggtgtg 240
Query: 1983 agcgggggcgggggcggcggcccgggctccagggtgagagcggcgctgcgggccggcccg 2042
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 agcgggggcgggggcggcggcccgggctccagggtgagggcggcgctgcgggccggcccg 300
Query: 2043 ccactacatcatcatcctcctgatttccttgaaaacctgcgcgagacgcagcgtcagagg 2102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccactacatcatcatcctcctgatttccttgaaaacctgcgcgagacgcagcgtcagagg 360
Query: 2103 ctcccggcgcgcacgccgccgccgctacctcctaaacctcgagcgccgactctcgtgtga 2162
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcccggcgcgcacgccgccgccgctacctcctaaacctcgagcgccgactcnnnnnnnn 420
Query: 2163 caaacacacacacaacatgctggacacacgaaggaaaggactgcctcctgctgggtgaaa 2222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 nnaacacacacacaacatgctggacacacgaaggaaaggactgcctcctgctgggtgaaa 480
Query: 2223 cacacccacactcgcgcgcagacacgcacatacacacacagacacacgacatgctggaca 2282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cacacccacactcgcgcgcagacacgcacatacacacacagacacacgacatgctggaca 540
Query: 2283 catgaagggactgcctcccgctgggtgagacacacccacactcacggacatgcgcagaca 2342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catgaagggactgcctcccgctgggtgagacacacccacactcacggacatgcgcagaca 600
Query: 2343 cacacataca 2352
||||||||||
Sbjct: 601 cacacataca 610
>BF01059A2D04
Length = 810
Score = 287 bits (145), Expect = 4e-77
Identities = 173/182 (95%), Gaps = 4/182 (2%)
Strand = Plus / Plus
Query: 2170 acacacaacatgctggacacacgaaggaaaggactgcctcctgctgggtgaaacacaccc 2229
|||||| |||||||||||||| ||||| |||||||||| ||||||||| ||||||||
Sbjct: 48 acacacgacatgctggacacatgaagg----gactgcctcccgctgggtgagacacaccc 103
Query: 2230 acactcgcgcgcagacacgcacatacacacacagacacacgacatgctggacacatgaag 2289
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 acactcacgcgcagacacgcacatacacacacagacacacgacatgctggacacatgaag 163
Query: 2290 ggactgcctcccgctgggtgagacacacccacactcacggacatgcgcagacacacacat 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ggactgcctcccgctgggtgagacacacccacactcacggacatgcgcagacacacacat 223
Query: 2350 ac 2351
||
Sbjct: 224 ac 225
Score = 214 bits (108), Expect = 5e-55
Identities = 111/112 (99%)
Strand = Plus / Plus
Query: 2217 gtgaaacacacccacactcgcgcgcagacacgcacatacacacacagacacacgacatgc 2276
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gtgaaacacacccacactcgcgcgcagacacccacatacacacacagacacacgacatgc 60
Query: 2277 tggacacatgaagggactgcctcccgctgggtgagacacacccacactcacg 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggacacatgaagggactgcctcccgctgggtgagacacacccacactcacg 112
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 205,343
Number of extensions: 9052
Number of successful extensions: 9052
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9044
Number of HSP's successfully gapped: 4
Length of query: 2352
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2335
Effective length of database: 8,119,229
Effective search space: 18958399715
Effective search space used: 18958399715
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)