BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20430 (UTR included)
(905 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A2E02 1185 0.0
>BF01059A2E02
Length = 867
Score = 1185 bits (598), Expect = 0.0
Identities = 642/654 (98%), Gaps = 2/654 (0%)
Strand = Plus / Plus
Query: 1 aaacgtaaaggtcgtggatttgggtcggaggcaggcggtggcggctccgaaagaggcaat 60
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 215 aaacgtaaaggtcgtggatttggatcggaggcaggcggaggcggctccgaaagaggcaat 274
Query: 61 aggggcagatatgacagtcttgcaccagaaggtaatgggaatactcccgggccacaaaga 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aggggcagatatgacagccttgcaccagaaggtaatgggaatactcccgggccacaaaga 334
Query: 121 tcggttgaaggatggatcctgtttgtcagtaatgtgcatgaagaagcacaggaagaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcggttgaaggatggatcctgtttgtcagtaatgtgcatgaagaagcacaggaagaagat 394
Query: 181 attcagaaccagttctcagagtttggggaaataaagaatattcatttaaatcttgataga 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 395 attcagaaccagttctcagagtttggggagataaagaatattcatttaaatcttgataga 454
Query: 241 cgcacaggattcttgaaaggctatgccctagtcgagtacgagacgtacaaacaggctgct 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgcacgggattcttgaaaggctatgccctagtcgagtacgagacgtacaaacaggctgct 514
Query: 301 agtgccagggaagctctagacggcacagacatactcggtcaggcaatttccgtggactgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 agtgccagggaagctctagacggcacagacatactcggtcaggcaatttccgtggactgg 574
Query: 361 tgttttgttaaaggaccaaccaagactcacaagaaacggcgataataattttttgcaata 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 575 tgttttgttaaaggaccaaccaagactcacaagaaacggcgataataactttttgcaata 634
Query: 421 g-tttatcacatctaaatgtattaagtacatactttttggtaattattgtctatgtaaat 479
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 635 gttttatcacatctaaatgtattaagtacatattttttggtaattattgtctatgtaaat 694
Query: 480 tctactagatatatttttaatctatctttcatttattatctgtcaaataacaaaaaaatg 539
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 695 tctactagatatatttttaatctatctttcatttattatctgtcaaataac-gaaaaatg 753
Query: 540 tctggaataatttattgaaaactggtgttataatttataacgctggacattaaatgcttc 599
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 754 tctggaataatttattgaaaactggtgttataatttataacgctggtcattaaaggcttc 813
Query: 600 attcatagttaacatagtctctactgaacattgtttaagctagctgtatttgta 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 attcatagttaacatagtctctactgaacattgtttaagctagctgtatttgta 867
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 107,636
Number of extensions: 2111
Number of successful extensions: 2111
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2109
Number of HSP's successfully gapped: 1
Length of query: 905
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 888
Effective length of database: 8,119,229
Effective search space: 7209875352
Effective search space used: 7209875352
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)