BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17828 (UTR included)
(2371 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1372_C1 3602 0.0
>BF14_1372_C1
Length = 1993
Score = 3602 bits (1817), Expect = 0.0
Identities = 1930/1965 (98%), Gaps = 7/1965 (0%)
Strand = Plus / Plus
Query: 411 atatacctattaattgtgttctcactgattattcaattcaaaagaaatatatatgtttta 470
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 13 atatacctattaattgagttctcactgattattaaattcaaaagaaatatatatgtttta 72
Query: 471 atatgttacctgataagaaaaaatatatgaatgagtgacaccggtagtgatatagaagcg 530
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atatgttacctgataggaaaaaatatatgaatgagtgacaccggtagtgatatagaagcg 132
Query: 531 actgagcatactgcactcatggacggacatatagctgaggcccgcccagacagggaagtt 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 actgagcatactgcactcatggacggacatatagctgaggcccgcccagacagggaagtt 192
Query: 591 gctgaacgcatcgcgagaaaacgtaaaacaaagtcggatacaacccgtaactatggaaca 650
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 193 gctgaacgcatcgcgagaaaacgtaaaacaaagtcggacacaacccgtaactatggaaca 252
Query: 651 gtggaacagccagatagtaggcagacaggcgcaggaagctcccgtcggaatccctcggag 710
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 253 gtggaacagccagatagtaggcaggcaggcgcaggaggctcccgtcggaatccctcggag 312
Query: 711 gaaacggcagaccagagcgaagaaatggagttgaaatatggtgcgcgacatgtcattaaa 770
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaaacggcagaccagagtgaagaaatggagttgaaatatggtgcgcgacatgtcattaaa 372
Query: 771 ctgtttgtgccagtaaccttgtgcatgatggtagtcgtcgccactatatcatccattact 830
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 373 ctgtttgtgccagtaaccttgtgcatgatggtagtggtcgccactatatcatccattact 432
Query: 831 ttttactccgtgaaagatgtctacttggcatatactccgttccatgaggagagtcctcac 890
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 433 ttttactccgtgaaagatgtctacttggcctatactccgttccatgaggagagtcctcat 492
Query: 891 gctgcgacgaaagtgtggaatgctctcgcaaattcaatgatcctgctgtgtgtgatagct 950
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 493 gctgcgacgaaagtgtggaatgctctcgcaaattcgatgatcctgctgtgtgtgatagct 552
Query: 951 tttatgacggtgttgcttatagtactgtacaagaaacgctgctacaaggtcatccatggc 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tttatgacggtgttgcttatagtactgtacaagaaacgctgctacaaggtcatccatggc 612
Query: 1011 tggttgatactgtcttcgctgatgctacttttcttgttctcatatctgtatatagaggaa 1070
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 613 tggttgatactgtcttcgctgatgctacttttcttgttctcatacctgtatatagaggaa 672
Query: 1071 gcgctgcgagcttataacatcccactggattatataacgatattttttgtgatgtggaac 1130
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gcgctgcgagcgtataacatcccactggattatataacgatattttttgtgatgtggaac 732
Query: 1131 tttggtgtgatgggaatgatcaccattcactggaagggtccgctgcgaatgcagcaggcg 1190
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tttggtgtgatgggaatgatcaccattcactggaagggtccgctgcgaatgcagcaggca 792
Query: 1191 tacctcatatttatagcggcattgatggcactggtttttattaaatatctgccggaatgg 1250
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tacctcatatttattgcggcattgatggcactggtttttattaaatatctgccggaatgg 852
Query: 1251 acaacatgggctgtcctagctgttatatcaatttgggatttgatagccgtcctcacacca 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 acaacatgggctgtcctagctgttatatcaatttgggatttgatagccgtcctcacacca 912
Query: 1311 aaaggacctctgaggatactcgttgagacggctcaggagagaaatgaaccgatattccca 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 aaaggacctctgaggatactcgttgagacggctcaggagagaaatgaaccgatattccca 972
Query: 1371 gcacttatttattcatcgacggtgatgtacatgctggcagcggtcgaaggatcttcgaac 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 gcacttatttattcatcgacggtgatgtacatgctggcagcggtcgaaggatcttcgaac 1032
Query: 1431 tcggagggtaacgttaactccgggggagatggtgacggtgagggaggttttgataacgct 1490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 tcggagggtaacgttaactccgggggagatggtgacggtgagggaggttttgataacgct 1092
Query: 1491 tggagggagcgcgccgcagccggagccccgagacacttacgagtggagggtacagcatca 1550
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 tggagagagcgcgccgcagctggagccccgagacacttacgagtggagggtacagcatca 1152
Query: 1551 gcgagatacgtcaccagggttgaggagccgtcgcaggatgctgatgacgagaagggcgtg 1610
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 gcgagatacgtcaccagggtcgaggagccgtcgcaggatgctgatgacgagaagggcgtg 1212
Query: 1611 aaattaggtctgggcgatttcatcttttacagcgttctggttggtaaggccagctcgtac 1670
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1213 aaattaggtctgggcgatttcatcttttacagcgtactggttggtaaggccagctcgtac 1272
Query: 1671 ggcgactggaacaccacactcgcttgtttcatggccatacttattggtctgtgtctcaca 1730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 ggcgactggaacaccacactcgcttgtttcatggccatacttattggtctgtgtctcaca 1332
Query: 1731 ctgttgttgctggctatattcaagaaggcgttgcccgctctgccaatatcaataactttc 1790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 ctgttgttgctggctatattcaagaaggcgttgcccgctctgccaatatcaataactttc 1392
Query: 1791 ggactcattttttacttcgcgacccgatccatagcaaaaccgttcgcggacgcgctcgcc 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 ggactcattttttacttcgcgacccgatccatagcaaaaccgttcgcggacgcgctcgcc 1452
Query: 1851 gctgaccaagttttcatttagcttgccactaaataaaactcaattaattgtatgaataat 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 gctgaccaagttttcatttagcttgccactaaataaaactcaattaattgtatgaataat 1512
Query: 1911 taatactctctgttaaacataagccggtagataaaaacttcccttactagtttcttcgta 1970
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1513 caatactctctgttaaacataagccggtagataaaaacttcccttactagtttcttcgta 1572
Query: 1971 cgaactaaatataataatttttattccagcttttttcttttattcaataaaa----ttaa 2026
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1573 cgaactaaatataataatttttattccagcttttttcttttattcaataaaaatatttaa 1632
Query: 2027 ataaatttcgacactaaatatgactgatttctagcattaatcgaaaaataacaatgccaa 2086
|||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1633 ataaatttcgacgcttaatatgactgatttctagcattaatagaaaaataacaatgccaa 1692
Query: 2087 cgtaattgtaactagaatattagatttcatatataatttatatgttaattgcaaaaaagc 2146
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1693 cgtaattgtaactagaattttagatttcatatataatttatatgttaattgcaaaaaagc 1752
Query: 2147 ttcgaaaagaaacgaaagattgacgaaaactatgaataaataaacattatacagttaaaa 2206
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1753 ttcgaaaagaaacg-aagattgacgaaaactatgaataaataaacattatacagttaaaa 1811
Query: 2207 atcttataagccgttagagacggttagactcgtcgttagaagctaacatctaaaataaat 2266
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 1812 atcttataagccgttagagacggttagactcgtcgttagaagctaacatccaaactaaat 1871
Query: 2267 aagcatttgtaaatatttttgtttcacatcactagttaggaacattacatattgtattta 2326
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 aagcatttgtaaata--tttgtttcacatcactagttaggaacattacatattgtattta 1929
Query: 2327 atagaaagaatcattgtattagcttactaatattatttattataa 2371
||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1930 ataaaaagaatcattctattagcttactaatattatttattataa 1974
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 349,581
Number of extensions: 20290
Number of successful extensions: 20290
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20287
Number of HSP's successfully gapped: 1
Length of query: 2371
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2354
Effective length of database: 8,119,229
Effective search space: 19112665066
Effective search space used: 19112665066
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)