BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12858 (UTR included)
(2698 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1304_C1 1136 0.0
BF14_497_C1 894 0.0
BF01039B2B08 186 1e-46
BF01055A1H12 96 4e-19
>BF14_1304_C1
Length = 1557
Score = 1136 bits (573), Expect = 0.0
Identities = 588/593 (99%)
Strand = Plus / Plus
Query: 2106 ccgcgcgctgcatgcatcaacccacggactattataggttcaaggaactattcggcgatc 2165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccgcgcgctgcatgcatcaacccacggactattataggttcaaggaactattcggcgatc 125
Query: 2166 agaaaggcgcggcgtcggccttggacatcatagccttgaacacagcgtgggtcgcgaagg 2225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agaaaggcgcggcgtcggccttggacatcatagccttgaacacagcgtgggtcgcgaagg 185
Query: 2226 cggacgctgatttggtcgcgtatttcaactcgataaaacaaaatgaatgatcgattgtta 2285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cggacgctgatttggtcgcgtatttcaactcgataaaacaaaatgaatgatcgattgtta 245
Query: 2286 agatacggccgctgaaatcgattttgtactccctgctgcgaggcctcatggtgttgcaga 2345
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 246 agatacggccgctgaaatcgattctgtactccctgctgcgaggcctcatggtgttgcaga 305
Query: 2346 tagctctgatattgctgaggagtgaatataactacgctttgggacatttcatactattgt 2405
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 306 tagctctgatattgctgaggagtgaatataaccacgctttgggacatttcatactattgt 365
Query: 2406 acacctgtttcctgatattcggcgaccacatctactcggactgatacaatgattgtctct 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acacctgtttcctgatattcggcgaccacatctactcggactgatacaatgattgtctct 425
Query: 2466 tagatgaactttgaggagatttgcgtatatttcagtgtatttttttgcgatatttttaat 2525
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 426 tagatgaactttgaggagatttgcgtatatttgagtgtatttttttgcgatatttttaat 485
Query: 2526 gttcttagcatataatttctgtatactccttgcacatatctaggttcgagtagaaattgt 2585
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gttctcagcgtataatttctgtatactccttgcacatatctaggttcgagtagaaattgt 545
Query: 2586 ataatctgtttggagaaaacgtctgtaacctgaatttgaattggcacagataattaatta 2645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ataatctgtttggagaaaacgtctgtaacctgaatttgaattggcacagataattaatta 605
Query: 2646 gcaaatttgtgttattggcttcatttgaaggggaaattttatttaaatataac 2698
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gcaaatttgtgttattggcttcatttgaaggggaaattttatttaaatataac 658
>BF14_497_C1
Length = 909
Score = 894 bits (451), Expect = 0.0
Identities = 464/470 (98%)
Strand = Plus / Plus
Query: 376 agtggttcgggggcctcgtgtcccctcgctggtggagttcccagtggttgttggaggccc 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agtggttcgggggcctcgtgtcccctcgctggtggagttcccagtggttgttggaggccc 499
Query: 436 tcacttcagtgctgggtgagaaggcccccgctttagggggactccccgccgagaggcaac 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcacttcagtgctgggtgagaaggcccccgctttagggggactccccgccgagaggcaac 559
Query: 496 aggacgcgttgttgttagatcatgtgttgccagctctgagactagattccagtaactcgg 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aggacgcgttgttgttagatcatgtgttgccagctctgagactagattccagtaactcgg 619
Query: 556 tgcgtgctgtcgcctcaccgagacttgaaaaatcagacatagagtctgctaccgacgagt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgcgtgctgtcgcctcaccgagacttgaaaaatcagacatagagtctgctaccgacgagt 679
Query: 616 tatcgttacataagggggcggctatagttagtatggcgatagaggcggccggtgtggacg 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tatcgttacataagggggcggctatagttagtatggcgatagaggcggccggtgtggacg 739
Query: 676 tgggtcgagccgctctggccagattactgaaagatcatcgcacagccagcgctgatgcca 735
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgggtcgagccgctctagccagattactgaaagatcatcgcacagccagcgctgatgccn 799
Query: 736 aagacctttggagggcgctgcaacactcgtctaccgctccgccccacgcgtgggacggtt 795
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 nagacctttggagggcgctgcaacactcgtctaccgctccgccccacgcgtgggacggtt 859
Query: 796 ggtgtgaaaggccaggatatccgctactatgtgccacacaagtggacgcg 845
||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 860 ggtgtgaaaggccnnnatatccgctactatgtgccacacaagtggacgcg 909
>BF01039B2B08
Length = 782
Score = 186 bits (94), Expect = 1e-46
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1285 tggtgataccagatttgggtaaacacaagtgggtgaggtacaacgtcggtgctcgcggcc 1344
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 503 tggtgataccagatttgggtaaacacaagtgggtcaggtacaacgtcggtgctcgcggcc 562
Query: 1345 tctaccgcgtcgcgccacaagacagacatctgaacgag 1382
||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tctaccgcgtcgcgccacaagacagacatctgaacgag 600
>BF01055A1H12
Length = 743
Score = 95.6 bits (48), Expect = 4e-19
Identities = 94/108 (87%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 50 ctacccataaaacaactgagcctatattgtttaattcttacatacatacttttagtcata 109
||||||||| ||||||| | ||| |||| |||||||||||| ||||||||||| |||||
Sbjct: 578 ctacccatataacaactaaacctgtattatttaattcttactcacatacttttaatcata 519
Query: 110 cgttacggaatacgaatgtttacagacatttaaaatgt-atttgattc 156
| ||||| ||||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 518 cattacgaaatacaaatgtttacagacgtttaacatgtcatttgattc 471
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,223
Number of extensions: 7329
Number of successful extensions: 7329
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7329
Number of HSP's successfully gapped: 4
Length of query: 2698
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2681
Effective length of database: 8,119,229
Effective search space: 21767652949
Effective search space used: 21767652949
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)