BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15239 (UTR included)
(5161 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3199_C1 835 0.0
>BF14_3199_C1
Length = 808
Score = 835 bits (421), Expect = 0.0
Identities = 433/437 (99%)
Strand = Plus / Plus
Query: 3871 atttccgtggctacaacacacgtcgtcgtatggctaaaaaccgccaggcaccgccaccgc 3930
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 344 atttccgtggctacaacacacgccgtcgtatggctaaaaaccgccaagcaccgccaccgc 403
Query: 3931 cacagcacgcagcaccggctccaccaacacagcaacatatcatgcagcagttctctgtgc 3990
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 404 cacagcacgcagcaccggctccaccaacgcagcaacatatcatgcagcagttctctgtgc 463
Query: 3991 aagagagagcagctcaattgcaaaactttgctgaacagattcacaaccaaaatcaagagg 4050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aagagagagcagctcaattgcaaaactttgctgaacagattcacaaccaaaatcaagagg 523
Query: 4051 tacataaaaatttacgccgaaataagccaggtatacgtcttcgagatgtacagaagcctc 4110
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 524 tacataaaaatttacgccgaaataagccaggtatacgtcttcgagatatacagaagcctc 583
Query: 4111 cagaagaatatcatcctcctccaggatttagtgttgtccctggtattataaaagaacagc 4170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cagaagaatatcatcctcctccaggatttagtgttgtccctggtattataaaagaacagc 643
Query: 4171 ggacgcaagttgaacgagatgcaagtcgactttcaagatctaacgataacgagagggaca 4230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ggacgcaagttgaacgagatgcaagtcgactttcaagatctaacgataacgagagggaca 703
Query: 4231 gtaaggacaagcccctgcaaacaaataaaaactggccaaatttgccttgcaataggcaat 4290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gtaaggacaagcccctgcaaacaaataaaaactggccaaatttgccttgcaataggcaat 763
Query: 4291 gtagcggtcttgtaagt 4307
|||||||||||||||||
Sbjct: 764 gtagcggtcttgtaagt 780
Score = 404 bits (204), Expect = e-112
Identities = 207/208 (99%)
Strand = Plus / Plus
Query: 3663 ttggtacaagcctgtgttagaggttggttagctcgacgtaactatttacgattaaaggcc 3722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggtacaagcctgtgttagaggttggttagctcgacgtaactatttacgattaaaggcc 60
Query: 3723 cagatggcaatatcagtgcttacattacaaagacatgtacgcggttggcttacaagaaag 3782
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 cagatggcaatatcagtgcttacattacaaagacatgtacgcgggtggcttacaagaaag 120
Query: 3783 aggctaaaagagagacaaaaacaattggcaagggaattccaaaaagggcaacaggagcag 3842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggctaaaagagagacaaaaacaattggcaagggaattccaaaaagggcaacaggagcag 180
Query: 3843 gaaaaccaaaggaagcaacgaaatgcgg 3870
||||||||||||||||||||||||||||
Sbjct: 181 gaaaaccaaaggaagcaacgaaatgcgg 208
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 570,547
Number of extensions: 10352
Number of successful extensions: 10352
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10352
Number of HSP's successfully gapped: 2
Length of query: 5161
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5143
Effective length of database: 8,109,745
Effective search space: 41708418535
Effective search space used: 41708418535
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)