BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17913 (UTR included)
(5170 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1E09 262 5e-69
BF01061A2A11 98 2e-19
>BF01030A1E09
Length = 779
Score = 262 bits (132), Expect = 5e-69
Identities = 166/176 (94%), Gaps = 1/176 (0%)
Strand = Plus / Minus
Query: 172 tactcaacggatttgaacgcggttttcacagttggtttacatatatttaggagcattgtc 231
|||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||
Sbjct: 748 tactcaacggatctgaacgcggttctcacagttggattacatataattaggagcattgtc 689
Query: 232 aaaa-tttgtttcgtcaaaatcggttaagggaaaaagaagttatggtcaattgaaaattt 290
|||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 688 aaaactttgtttcatcaaaatcggttaagggaaaaagaagttacggtcaattgaaaattt 629
Query: 291 acttcaagcactgcttcaatacttttaaacactacaacttaatattgattagttat 346
|| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 628 acatcaaacactgcttcaacacttttaaacactacaacttaatattgattagttat 573
Score = 178 bits (90), Expect = 6e-44
Identities = 145/163 (88%), Gaps = 9/163 (5%)
Strand = Plus / Minus
Query: 371 attagttatattagttacaaaaaaaatatgttctaatatatgttaatcttaaaattaaaa 430
|||||||||||||||||| |||||| |||||| ||| ||| ||||||||||| |||||||
Sbjct: 574 attagttatattagttactaaaaaa-tatgttgtaacatacgttaatcttaatattaaaa 516
Query: 431 cttatgagaggtaacaaaaataacaaataacgcagtgcccgcgggcgcggt--------t 482
|||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 515 cttatgagaggtaacaaaaataacaaataacgcagtgcgcgcgggcgcggttgaagcgtt 456
Query: 483 gaacactgtgctcgacagatggcgttgataaaatacgtcatca 525
||||||||||||||| ||||||||||||||| | |||||||||
Sbjct: 455 gaacactgtgctcgatagatggcgttgataacacacgtcatca 413
>BF01061A2A11
Length = 815
Score = 97.6 bits (49), Expect = 2e-19
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 3 tatacatataataagacagtgaaaatcgaatgtctgtacattaaatatttatccaaaaaa 62
|||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 103 tatacatataataagacagtaaaaattgaatgtctgtacaataaatatttttccaaaaaa 162
Query: 63 ctgat 67
|||||
Sbjct: 163 ctgat 167
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 526,747
Number of extensions: 9995
Number of successful extensions: 9995
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9993
Number of HSP's successfully gapped: 3
Length of query: 5170
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5152
Effective length of database: 8,109,745
Effective search space: 41781406240
Effective search space used: 41781406240
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)