BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN16254 (UTR included)
         (5077 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_1841_C1                                                          666   0.0  

>BF14_1841_C1
          Length = 1417

 Score =  666 bits (336), Expect = 0.0
 Identities = 346/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4730 cgaacatctttaaaatttacaatagagtccattgtactacaagatttaaaaaaaaatatg 4789
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1    cgaacatctttaaaatttacaatagagtccattgtactacaagatttaaaa-aaaatatg 59

                                                                        
Query: 4790 ttaagacaaactgtaagggtttatgatataaaaacgcttctatataaaaacagctatctt 4849
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 60   ttaagacaaactgtaagggtttatgatataaaaacgcttctaaataaaaacagctatctt 119

                                                                        
Query: 4850 tgagatgcgcctttgaaatgaccgcattacttgttaacatagttaaatacctcatatttt 4909
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120  tgagatgcgcctttgaaatgaccgcattacttgttaacatagttaaatacctcatatttt 179

                                                                        
Query: 4910 gtagtgttattgagtcattttaatgagtctcataatataatattttagtacgaggtcgct 4969
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180  gtagtgttattgagtcattttaatgagtctcataatataatattttagtacgaggtcgct 239

                                                                        
Query: 4970 ataacgcttgacgtgcttagagtgtgcgaattactcactaaatgcagtctagacgaaagt 5029
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240  ataacgcttgacgtgcttagagtgtgcgaattactcactaaatgcagtctagacgaaagt 299

                                                            
Query: 5030 tgatgtagttacactttaattacgtgatatattacagtgtaaatgtaa 5077
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300  tgatgtagttacactttaattacgtgatatattacagtgtaaatgtaa 347


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 423,729
Number of extensions: 7061
Number of successful extensions: 7061
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7060
Number of HSP's successfully gapped: 1
Length of query: 5077
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5059
Effective length of database: 8,109,745
Effective search space: 41027199955
Effective search space used: 41027199955
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)