BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16880 (UTR included)
(3403 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1404_C1 555 e-157
BF14_736_C1 96 4e-19
BF14_2467_C1 92 7e-18
BF01054B2B08 90 3e-17
BF01059B2F03 74 2e-12
BF01059A2H01 72 6e-12
>BF14_1404_C1
Length = 756
Score = 555 bits (280), Expect = e-157
Identities = 289/292 (98%)
Strand = Plus / Plus
Query: 3112 ctcgctaacacctgtattgactaggatattgagaatatattatatacgtagggtagacat 3171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 ctcgctaacacctgtattgactaggatattgagaatatattatatacgtagggtagacat 89
Query: 3172 atatttagtttagagaaccgctagtgatttgaaatttatacagatatagcattagtgtaa 3231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atatttagtttagagaaccgctagtgatttgaaatttatacagatatagcattagtgtaa 149
Query: 3232 ggtcagactactatttgaagcgtatcatgtattttatacctcaagaaagcaataatatat 3291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ggtcagactactatttgaagcgtatcatgtattttatacctcaagaaagcaataatatat 209
Query: 3292 atacgggggttacacagagcgggcgcgcggcgtggcgggctacacactaactgacgcttc 3351
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ataccggggttacatagagcgggcgcgcggcgtggcgggctacacactaactgacgcttc 269
Query: 3352 catagtacttataaactttaagggaatgtaacgcggcgagcgaggcgtttta 3403
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 270 catagtacttataaactttaagcgaatgtaacgcggcgagcgaggcgtttta 321
>BF14_736_C1
Length = 796
Score = 95.6 bits (48), Expect = 4e-19
Identities = 72/79 (91%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 766 gaaagcgcaaccgtctctctcactcatcggacgaaac--agccattaaagactacttcac 823
||||| ||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 732 gaaagggcaaccggctctctcactcattggacgaaacgcagccactaaagactacttcac 673
Query: 824 gccgctcttctgtgagagg 842
|||| ||||||||||||||
Sbjct: 672 gccgatcttctgtgagagg 654
>BF14_2467_C1
Length = 1121
Score = 91.7 bits (46), Expect = 7e-18
Identities = 58/61 (95%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 782 ctctcactcatcggacgaaa--cagccattaaagactacttcacgccgctcttctgtgag 839
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 330 ctctcactcatcggacgaaaaacagccattaaagactacttcacgccgatcttctgtgag 271
Query: 840 a 840
|
Sbjct: 270 a 270
>BF01054B2B08
Length = 807
Score = 89.7 bits (45), Expect = 3e-17
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 766 gaaagcgcaaccgtctctctcactcatcggacgaaac--agccattaaagactacttcac 823
||||| ||||||| ||||||||||||||| ||||||| |||||||||||||| ||| ||
Sbjct: 726 gaaagggcaaccggctctctcactcatcgaacgaaacgcagccattaaagactgctttac 667
Query: 824 gccgctcttctgtgagaggatagt 847
|||| |||||||||||||| ||||
Sbjct: 666 gccgatcttctgtgagaggctagt 643
>BF01059B2F03
Length = 703
Score = 73.8 bits (37), Expect = 2e-12
Identities = 52/56 (92%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 786 cactcatcggacgaaac--agccattaaagactacttcacgccgctcttctgtgag 839
||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||
Sbjct: 1 cactcatcggacgaaactcagccattaaaggctacttcacgccgatcttctgtgag 56
>BF01059A2H01
Length = 865
Score = 71.9 bits (36), Expect = 6e-12
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 766 gaaagcgcaaccgtctctctcactcatcggacgaaac--agccattaaagactacttcac 823
||||| ||||| | ||||||||||||||||| ||| | ||||||||||||||||| ||
Sbjct: 202 gaaagggcaactggctctctcactcatcggaagaatcgcagccattaaagactactccat 261
Query: 824 gccgctcttctgtgagagg 842
|||| ||||||||||||||
Sbjct: 262 gccgatcttctgtgagagg 280
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,582
Number of extensions: 4858
Number of successful extensions: 4858
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 4853
Number of HSP's successfully gapped: 6
Length of query: 3403
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3385
Effective length of database: 8,109,745
Effective search space: 27451486825
Effective search space used: 27451486825
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)