BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08967 (UTR included)
(2566 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_117_C1 3947 0.0
>BF14_117_C1
Length = 2540
Score = 3947 bits (1991), Expect = 0.0
Identities = 2067/2094 (98%), Gaps = 10/2094 (0%)
Strand = Plus / Plus
Query: 483 gagtacctgttcgtgaagatgggcccaggcgataggggcccgaagaccacagaggatcga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gagtacctgttcgtgaagatgggcccaggcgataggggcccgaagaccacagaggatcga 316
Query: 543 tcagcacccattgatcattccggcgtcaaaaaatggcttttagacaataccatgctcgta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcagcacccattgatcattccggcgtcaaaaaatggcttttagacaataccatgctcgta 376
Query: 603 gttacattggcgggtgttataactggaattgctattggttttggtcttcgcccctaccac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gttacattggcgggtgttataactggaattgctattggttttggtcttcgcccctaccac 436
Query: 663 ctaggtccagatgcattgatgataatatcatatccaggagagttatttatgagattatta 722
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctaggtccagatgcattaatgataatatcatatccaggagagttatttatgagattatta 496
Query: 723 aagctaatgattttgcctcttatcattgctagtctcattgctggctcagcaagccttaac 782
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aagctcatgattttgcctcttatcattgctagtctcattgctggctcagcaagccttaac 556
Query: 783 gctaagatgagcggtaaaattgcaattcggacactactttactttatactaacctcaatg 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gctaagatgagcggtaaaattgcaattcggacactactttactttatactaacctcaatg 616
Query: 843 tttaatgcattcctcggtatacttttgtcagttatgattcatccagggaagccggagtta 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tttaatgcattcctcggtatacttttgtcagttatgattcatccagggaagccggagtta 676
Query: 903 aaagacgactttggtacgtcatttgaaaataaaagagaccatagcattctggacagtctg 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaagacgactttggtacgtcatttgaaaataaaagagaccatagcattctggacagtctg 736
Query: 963 cttgatattggcagaaacatttttccggacaatattgttcaagctgcattccaacaagca 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cttgatattggcagaaacatttttccggacaatattgttcaagctgcattccaacaagca 796
Query: 1023 catacagtatatgcggaaccgaagacattatttgctaaaaatgcgactgaaaatggcact 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 catacagtatatgcggaaccgaagacattatttgctaaaaatgcgactgaaaatggcact 856
Query: 1083 gagccagttcttgttcgtgatattagctacagatctggtacaaacactttgggcttagta 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gagccagttcttgttcgtgatattagctacagatctggtacaaacactttgggcttagta 916
Query: 1143 tttttctgtcttgtatttggaagtttgttagggacacttgggccgaaaggcaaagttgtt 1202
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 917 tttttctgtcttgtatttggaagtttgttagggacacttggaccgaaaggcaaagttgtt 976
Query: 1203 attgacttcttccaagccatctttgaagttattatgaaaatggtcactggtgtaatgtgg 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 attgacttcttccaagccatctttgaagttattatgaaaatggtcactggtgtaatgtgg 1036
Query: 1263 ttcactcctgttggggtcagtagcgtgatagctggaaagattcttggtgtaagcaatgtt 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 ttcactcctgttggggtcagtagcgtgatagctggaaagattcttggtgtaagcaatgtt 1096
Query: 1323 ggccaagttatgtcccaactagcgtggtttatcgcaacagtcgcagttgggatatttctt 1382
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 ggccaagttatgtctcaactagcgtggtttatcgcaacagtcgcagttgggatatttctt 1156
Query: 1383 taccaacttatagttatgcagttaatctattttattttcttaagaagaaacccgtataag 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 taccaacttatagttatgcagttaatctattttattttcttaagaagaaacccgtataag 1216
Query: 1443 ttctattggggactatctcaagccatgcttaccgcgtcagctacggcttccacggctgca 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 ttctattggggactatctcaagccatgcttaccgcgtcagctacggcttccacggctgca 1276
Query: 1503 gctctcccagtaaccttccgtgctatggaaggtccgttgaacattgattcacgcatcact 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 gctctcccagtaaccttccgtgctatggaaggtccgttgaacattgattcacgcatcact 1336
Query: 1563 cgtttcgtccttcctatcggttgtaatatcaacatggatggcacagcattatttctggcc 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 cgtttcgtccttcctatcggttgtaatatcaacatggatggcacagcattatttctggcc 1396
Query: 1623 gttgctagcgtcttcgtatgtcagatgaacaatttgcaccttggattcgcccaactagct 1682
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1397 gttgctagcgtcttcgtatgtcagatgaacaatttgcatcttggattcgcccaactagct 1456
Query: 1683 actatatttctaacatcgacggcagcgtcagtgtcttcggcttcagtgccgtccgcagcg 1742
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1457 actatatttctaacatcgacggcagcgtcagtgtcttcggcttcagtaccgtccgcagcg 1516
Query: 1743 atggtgctgttattagtcgttttagcggcagttgacgcaccgacacacgatgtatctctg 1802
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 atggtgctgttattagtcgttctagcggcagttgacgcaccgacacacgatgtatctctg 1576
Query: 1803 ctattcgctgtggattggcttgttgaccgcatccgaacgacaaacaacatgcttggagat 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 ctattcgctgtggattggcttgttgaccgcatccgaacgacaaacaacatgcttggagat 1636
Query: 1863 tgctacgctgcggctgttgtagagaaactttccaaaaacgaactcatggcctgtgatgct 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1637 tgctacgctgcggctgttgtagagaaactttccaaaaacgaactcatggcctgtgatgct 1696
Query: 1923 gcttctatggaccaatcgcttcccaatggtttgccgacatcaaacactgagctagaaata 1982
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1697 gcttctatggaccaatcgcttcccaatggtttgccgacatcaaacactgaactagaaata 1756
Query: 1983 ggtatagtaacgccaggggacaagtctatagcatcggacgatgttattattgatatgcat 2042
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 ggtatagtaacgcccggggacaagtctatagcatcggacgatgttattattgatatgcat 1816
Query: 2043 ttacataatactaatagattatagatcccgttttataagggcctttacgttagactgtca 2102
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1817 ttacataatactaatagattatagatcctgttttataagggcctttacgttagactgtca 1876
Query: 2103 tttagactactattctcattgtaaactgttaagaatataatatgttaggcatttgtaact 2162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1877 tttagactactattctcattgtaaactgttaagaatataatatgttaggcatttgtaact 1936
Query: 2163 gttttagatttaactaagatttgaaagttttctaagtcagttttggacattcttaagctt 2222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 gttttagatttaactaagatttgaaagttttctaagtcagttttggacattcttaagctt 1996
Query: 2223 ataaacgtatctttagtaacagttttgattgtctttg----------ataattttcattc 2272
||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 1997 ataaacgtatccttagtaacagttttgattgtctttgttacgttagaataattttcattc 2056
Query: 2273 ataacaaatcaacgaagagcgtgtaaactgtcagatttgacaaaataagcgacagtatta 2332
||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 2057 ataacaaatcaacgaagagtatgtaaactgtcagatttgacaaaatgagcgacagtatta 2116
Query: 2333 atagtaatagtatgaaaataacaattaatagtgtcacattcttacgagtatacctttaaa 2392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 atagtaatagtatgaaaataacaattaatagtgtcacattcttacgagtatacctttaaa 2176
Query: 2393 actgtgttttgacatgtgtttttttcggtgagatattattatttatgtctagttgtaggc 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 actgtgttttgacatgtgtttttttcggtgagatattattatttatgtctagttgtaggc 2236
Query: 2453 atttatttaatatgtaagcacgtacactggcatctcctagctagttttgtgaacactgta 2512
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2237 atttatttaatatgtaagcacgtacactggcatctcctagctagttttgtaaacactgta 2296
Query: 2513 tttattgtcaatttggttagtattatataaatatgaaaattatttaacctccct 2566
|||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 2297 tttattgtcaattttggtagtattatataaatatgaaaattatttaacctccct 2350
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 263,062
Number of extensions: 4636
Number of successful extensions: 4636
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4636
Number of HSP's successfully gapped: 2
Length of query: 2566
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2549
Effective length of database: 8,119,229
Effective search space: 20695914721
Effective search space used: 20695914721
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)