BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN06078 (UTR included)
         (1903 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_2578_C1                                                          406   e-113

>BF14_2578_C1
          Length = 1283

 Score =   bits (205), Expect = e-113
 Identities = 218/224 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1680 ctctgtcgatggaccatgatcttagtgtttttcaatttctttttcggccgttaaccagac 1739
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2    ctctgtcgatggaccatgatcttagtgtttttcaatttcattttcggccgttaaccagac 61

                                                                        
Query: 1740 tgacctgttagcatttgtgatagtagaaccctaattattactcgtgatttttctaacttt 1799
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   tgacctgttagcatttgtgatagtagaaccctaattattactcgtgatttttctaacttt 121

                                                                        
Query: 1800 ttaaaacaacacaaattttgcatttacacaattaaatttaataatataccacaattacat 1859
            ||||||||||||||||||||||||||||     |||||||||||||||||||||||||||
Sbjct: 122  ttaaaacaacacaaattttgcatttacannnnnaaatttaataatataccacaattacat 181

                                                        
Query: 1860 cagcgacaataccacacttaaagacttgacgaactttatactaa 1903
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  cagcgacaataccacacttaaagacttgacgaactttatactaa 225


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 213,643
Number of extensions: 3753
Number of successful extensions: 3753
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3753
Number of HSP's successfully gapped: 1
Length of query: 1903
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1886
Effective length of database: 8,119,229
Effective search space: 15312865894
Effective search space used: 15312865894
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)