BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21361 (UTR included)
(2842 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_742_C1 1530 0.0
BF01045B1C06 1249 0.0
BF01025B2C02 708 0.0
>BF14_742_C1
Length = 776
Score = 1530 bits (772), Expect = 0.0
Identities = 775/776 (99%)
Strand = Plus / Plus
Query: 764 gaaaataaaatggatcaaagccgacgccacaaactttattgcggagtcaaccaacatccc 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaataaaatggatcaaagccgacgccacaaactttattgcggagtcaaccaacatccc 60
Query: 824 aacagcaaacaattgggcggactccgtagatgatgaacagagtttcgcatactcgagctc 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacagcaaacaattgggcggactccgtagatgatgaacagagtttcgcatactcgagctc 120
Query: 884 gtcccgcaatcgcgggccgatggtactgccgtcagcatcgcgtgcagcacgtggaggtct 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcccgcaatcgcgggccgatggtactgccgtcagcatcgcgtgcagcacgtggaggtct 180
Query: 944 ggctgtggacgatgagtccataccgcggcgcccaccctacatcgctcatatatcaaacct 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggctgtggacgatgagtccataccgcggcgcccaccctacatcgctcatatatcaaacct 240
Query: 1004 gccctatgatgtcgaagaaagtgccatcatggagctctttgcaggactcaagatcaataa 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccctatgatgtcgaagaaagtgccatcatggagctctttgcaggactcaagatcaataa 300
Query: 1064 cttgagattgccaaaggagggaggccgtcttaaaggctttggcgatgtagatttcgaaga 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttgagattgccaaaggagggaggccgtcttaaaggctttggcgatgtagatttcgaaga 360
Query: 1124 cagggagagtcttgtcaatgctatgaacctgccggatttgataatcagcggaaggagact 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagggagagtcttgtcaatgctatgaacctgccggatttgataatcagcggaaggagact 420
Query: 1184 tagaattgaagtatcgaatcaggacaatgatcgtcgtatgggcagaaataaatcagatcg 1243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 tagaattgaagtatcgaatcaggacaatgatcgtcgtatgggcagaaataaatctgatcg 480
Query: 1244 agacagggaatatgaccccgagcgtactatgggagactggcgctctggacctcgggccgt 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agacagggaatatgaccccgagcgtactatgggagactggcgctctggacctcgggccgt 540
Query: 1304 gcctgaaccgacaaggggccgagatagagagagggagagagacagagatagggaaaggga 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcctgaaccgacaaggggccgagatagagagagggagagagacagagatagggaaaggga 600
Query: 1364 atcaagcgccgataaccgtccgggcggctggcgtgatgctgagcgacccgagccgccgcg 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcaagcgccgataaccgtccgggcggctggcgtgatgctgagcgacccgagccgccgcg 660
Query: 1424 ggcgccctacggtggtcgggattcatatggacgagacagagaaggaggccgtgaacgcgg 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggcgccctacggtggtcgggattcatatggacgagacagagaaggaggccgtgaacgcgg 720
Query: 1484 ctatggcggacgtgatggattccgcacagcagatagagacggatatggaagtcgcg 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctatggcggacgtgatggattccgcacagcagatagagacggatatggaagtcgcg 776
>BF01045B1C06
Length = 759
Score = 1249 bits (630), Expect = 0.0
Identities = 720/751 (95%), Gaps = 18/751 (2%)
Strand = Plus / Plus
Query: 1873 gtgatcgtcgaggaggtccaaggcgtgatgatcgcgaccgcggcagagattcccgcagct 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtgatcgtcgaggaggtccaaggcgtgatgatcgcgaccgcggcagagattcccgcagct 70
Query: 1933 acaaccgtgaccgcgccgactactcccgggacgatagggacagacgcgacggttccagag 1992
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 acaaccgtgaccgcgccgattactcccgggacgatagggacagacgcgacggttccagag 130
Query: 1993 acgacagggacaagcgcgactactccagggacaatagggatagacgggactattccaagg 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acgacagggacaagcgcgactactccagggacaatagggatagacgggactattccaagg 190
Query: 2053 atgaccgggacaggcgggactattctaaggacgatagagacaggcgcgactacaataaag 2112
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atgaccgggacaggcgagactattctaaggacgatagagacaggcgcgactacaataaag 250
Query: 2113 atgacagggataggcgcgattacaacaaggacgataaagaaaagcgcgattacaacaggg 2172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgacagggataggcgcgattacaacaaggacgataaagaaaagcgcgattacaacaggg 310
Query: 2173 atgatagggaaaaacgcgattacaacagagatgatagggaaaagcgcgattacaacagag 2232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atgatagggaaaaacgcgattacaacagagatgatagggaaaagcgcgattacaacagag 370
Query: 2233 atgatagagaaaagcgcgattataacagagatgacagggaaaagcgcgattacaacagag 2292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atgatagagaaaagcgcgattataacagagatgacagggaaaagcgcgattacaacagag 430
Query: 2293 agatgaagggggaaaacgcgat----------attaca------actgcgattacaacag 2336
|||| ||| ||| |||||| || ||| | |||||||||||||
Sbjct: 431 --atgacagggaaaagcgcgattacaacagagatgacagggaaaagcgcgattacaacag 488
Query: 2337 agatgacagggaaaagcgcgattacaacagagatgacagggaaaaacgcgattacaacag 2396
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agatgacagggaaaaacgcgattacaacagagatgacagggaaaaacgcgattacaacag 548
Query: 2397 agatgacaggcgacgcgactacaacagagaggataataaggatagaagagactactcggg 2456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agatgacaggcgacgcgactacaacagagaggataataaggatagaagagactactcggg 608
Query: 2457 agaggacagggataggcggtacagggatgacggtgaccgcaaggatggagatcacgactc 2516
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agaggaccgggaaaggcggtacagggatgacggtgaccgcaaggatggagatcacgactc 668
Query: 2517 gcggcgggacgtcgccgaccgtccgcgacaggagtcacccgaaagacgtggggacaacga 2576
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gcggcgggacgtcgccgaccgcccgcgacaggagtcacccgaaagacgtggggacaacga 728
Query: 2577 cattcgtaatggaagacgtagtcgtgagaga 2607
|||||||||||||||||||||||||||||||
Sbjct: 729 cattcgtaatggaagacgtagtcgtgagaga 759
>BF01025B2C02
Length = 710
Score = 708 bits (357), Expect = 0.0
Identities = 366/369 (99%)
Strand = Plus / Minus
Query: 383 accgttcagttcttcgcatttgtccatcttttgtccttgcgcagccgcagcggatagcgc 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 accgttcagttcttcgcatttgtccatcttttgtccttgcgcagccgcagcggatagcgc 396
Query: 443 cagagcatattctctgtcgcttttcatcttagcctggaggcttctcttcatggtctccat 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cagagcatattctctgtcgcttttcatcttagcctggaggcttctcttcatggtctccat 336
Query: 503 gagcctcagctcagcgtcctggcgcgccagcagggcctcgtgcgccgcccgccccgcacc 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gagcctcagctcagcgtcctggcgcgccagcagggcctcgtgcgccgcccgccccgcacc 276
Query: 563 gttcgacgcgtaccccattacaaagcctacacttaacactacacaacacgacagtctagc 622
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gttcgacgcgtaccccattataaagcctacacttaacactacacaacacgacagtctagc 216
Query: 623 acgcacatcacaacgtaaacacaaacactattcacatttccccgttatcactgcaccttc 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 acgcacatcacaacgtaaacacaaacactattcacatttccccgttatcactgcaccttc 156
Query: 683 tacgtcattcaatgatcgaaaaattaaaattttcgaatgtaattttttaaaattaaacga 742
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 155 tacgtcattcaatgatcgaaatataaaaattttcgaatgtaattttttaaaattaaacga 96
Query: 743 attttattg 751
|||||||||
Sbjct: 95 attttattg 87
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,325
Number of extensions: 5391
Number of successful extensions: 5391
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5369
Number of HSP's successfully gapped: 16
Length of query: 2842
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2825
Effective length of database: 8,119,229
Effective search space: 22936821925
Effective search space used: 22936821925
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)