BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10856 (UTR included)
(1525 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1E09 710 0.0
>BF01059A1E09
Length = 846
Score = 710 bits (358), Expect = 0.0
Identities = 373/377 (98%), Gaps = 2/377 (0%)
Strand = Plus / Plus
Query: 495 ggtaaaatgtcacgatatggcgactgcaaggtttatgttggtgatttaggaaacaacgct 554
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 177 ggtaaaatgtcacgatatggcgactgcaaggtttatgttggagatttaggaaacaacgct 236
Query: 555 agtaaacctgaacttgaagatgcattttcttattatggccctttaaggaatgtttgggtg 614
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agtaaacctgaacttgaagacgcattttcttattatggccctttaaggaatgtttgggtg 296
Query: 615 gctagaaatccaccaggtttcgcttttgttgaatttgaagatcctcgggatgcggaagat 674
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 297 gctagaaatccaccaggtttcgctttt--tgaatttgaagatcctcgggatgcggaagat 354
Query: 675 gcaatacgaggtttagatggacgaacaatatgtggacgtcgtgctcgagtggaaatgtca 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gcaatacgaggtttagatggacgaacaatatgtggacgtcgtgctcgagtggaaatgtca 414
Query: 735 aatggcggtcggggctacgggggccgcggacctcctccgcgctcgcggctaccaccacgg 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aatggcggtcggggctacgggggccgcggacctcctccgcgctcgcggctaccaccacgg 474
Query: 795 ccctacgacgaccgttgttatgactgtggagaccgtggccattacgccagagactgcact 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ccctacgacgaccgttgttatgactgtggagaccgtggccattacgccagagactgcact 534
Query: 855 cgacgccgccgtcgcag 871
|||||||||||||||||
Sbjct: 535 cgacgccgccgtcgcag 551
Score = 351 bits (177), Expect = 2e-96
Identities = 180/181 (99%)
Strand = Plus / Plus
Query: 241 acgatatctacaaatccatattctaggattcacttgaatttacatataagtttcgtagtg 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 acgatatctacaaatccatattctatgattcacttgaatttacatataagtttcgtagtg 60
Query: 301 ttgtgaatcgactgtcgaatacaaaacaattattccgtctcatttcatagtgatacctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtgaatcgactgtcgaatacaaaacaattattccgtctcatttcatagtgatacctac 120
Query: 361 ttttacaaacaatcaatgaaacattacattttactgcattagtccacagtgcttagggta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttacaaacaatcaatgaaacattacattttactgcattagtccacagtgcttagggta 180
Query: 421 a 421
|
Sbjct: 181 a 181
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,784
Number of extensions: 5098
Number of successful extensions: 5098
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5097
Number of HSP's successfully gapped: 2
Length of query: 1525
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1508
Effective length of database: 8,119,229
Effective search space: 12243797332
Effective search space used: 12243797332
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)