BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20396 (UTR included)
(1750 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_170_C1 1687 0.0
>BF14_170_C1
Length = 871
Score = 1687 bits (851), Expect = 0.0
Identities = 866/871 (99%)
Strand = Plus / Plus
Query: 432 catcaggtgatcgagaattaggagtagaatttctgcatagggatatttccaatatttacg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcaggtgatcgagaattaggagtagaatttctgcatagggatatttccaatatttacg 60
Query: 492 taaaacaatatgtctgggaaggataaattagcgattttcccttctcggggagcccaaatg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaacaatatgtctgggaaggataaattagcgattttcccttctcggggagcccaaatg 120
Query: 552 ttaataaaaggccgtttggctggagcccagaaagggcatggtctcttgaaaaagaaggct 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaataaaaggccgtttggctggagcccagaaagggcatggtctcttgaaaaagaaggct 180
Query: 612 gatgccttacaagtcagattccgtatgatcttaagcaaaatcattgagacaaaaactctg 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgccttacaagtcagattccgtatgatcttaagcaaaatcattgagacaaaaactctg 240
Query: 672 atgggtgaagtgatgaaagaggctgcattttccctggcggaagctaagtttacaaccggt 731
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgggtgaagtgatgaaagaggccgcattttccctggcggaagctaagtttacaaccggt 300
Query: 732 gacttcaaccaagtggtgctccaaaacgttactaaagcacaaattaaaattcgctccaag 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacttcaaccaagtggtgctccaaaacgttactaaagcacaaattaaaattcgctccaag 360
Query: 792 aaagacaatgtcgctggtgtaactctgccgatatttgagtcctaccaggatggttctgac 851
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 aaagacaatgtcgctggtgtaactctgccgatatttgagtcctaccaggatggttccgac 420
Query: 852 acatatgagttggcgggccttgctcgtggtggacaacagctctccaagctgaagaagaac 911
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acatatgagttggctggccttgctcgtggtggacaacagctctccaagctgaagaagaac 480
Query: 912 ttccagagcgctgtcaagttactggtggagctggcttccctacagacctcattcgtcacc 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttccagagcgctgtcaagttactggtggagctggcttccctacagacctcattcgtcacc 540
Query: 972 ctggacgaggtcatcaagataaccaaccgtcgtgtcaatgctatcgagcatgtcattatt 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 541 ctggacgaggtcatcaagataaccaaccgtcgtgtcaatgctatcgagcatgtgattatt 600
Query: 1032 ccccgtctggagcgcaccttggcctacatcatctcggagctggacgagctggagcgtgag 1091
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 601 ccccgtctggagcgcaccttggcctacatcatctccgagctggacgagctggagcgtgag 660
Query: 1092 gagttctaccgcctcaagaagatccaggacaagaagaagatcatcaaggacaaagctgaa 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagttctaccgcctcaagaagatccaggacaagaagaagatcatcaaggacaaagctgaa 720
Query: 1152 gcgagaaaagctcaaatgttggcagccaaccgtgaccaggacatgagagacagtgttgcc 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcgagaaaagctcaaatgttggcagccaaccgtgaccaggacatgagagacagtgttgcc 780
Query: 1212 aacctgttggacgaaggggatgaagatttgctcttctaaaaacattgaatgttagtagca 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aacctgttggacgaaggggatgaagatttgctcttctaaaaacattgaatgttagtagca 840
Query: 1272 gtcgaattgaagccacacttgaaccgataga 1302
|||||||||||||||||||||||||||||||
Sbjct: 841 gtcgaattgaagccacacttgaaccgataga 871
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 248,729
Number of extensions: 5635
Number of successful extensions: 5635
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5635
Number of HSP's successfully gapped: 1
Length of query: 1750
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1733
Effective length of database: 8,119,229
Effective search space: 14070623857
Effective search space used: 14070623857
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)