BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08998 (UTR included)
(1852 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1359_C1 1402 0.0
>BF14_1359_C1
Length = 882
Score = 1402 bits (707), Expect = 0.0
Identities = 716/719 (99%)
Strand = Plus / Plus
Query: 685 ttttcggtttctccatgttaaaaaagaccccagactcaaattgctcatgccctaattgtg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttcggtttctccatgttaaaaaagaccccagactcaaattgctcatgccctaattgtg 60
Query: 745 atagaccagtttcagcgacaagatttgctccacatttggaaaaatgcatgggtatgggtc 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atagaccagtttcagcgacaagatttgctccacatttggaaaaatgcatgggtatgggtc 120
Query: 805 gcaacagttctcgtatagcatcccgtcgtattgcatccaatagtagagaaccaacctcat 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaacagttctcgtatagcatcccgtcgtattgcatccaatagtagagaaccaacctcat 180
Query: 865 atgctggcctattaagtgacgatgaggacgacgctgattggtcaacaatacacagcgagc 924
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgctggcctattgagtgacgatgaggacgacgctgattggtcaacaatacacagcgagc 240
Query: 925 gacgcaagcgaagaataaaaaacaataacagcaagaaacccgccaaaattcacaaaggta 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacgcaagcgaagaataaaaaacaataacagcaagaaacccgccaaaattcacaaaggta 300
Query: 985 acaatggaaaccataattcggattccaacgacggttgcgccacctacgagactatgtccg 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaatggaaaccataattcggattccaacgacggttgcgccacctacgagactatgtccg 360
Query: 1045 caaatgaaaagaagaatctccttctccaaatatgtggtgttgtctctgaacacaccaaga 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaatgaaaagaagaatctccttctccaaatatgtggtgttgtctctgaacacaccaaga 420
Query: 1105 aattgtgcacacgatctacccgttgtccccaacacacggaagaacagcgccgggctttac 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aattgtgcacacgatctacccgttgtccccaacacacggaagaacagcgccgggctttac 480
Query: 1165 ggaacagtgttctagaaccttccactccggagtcacagacaatggggttgactgctgacg 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaacagtgttctagaaccttccactccggagtcacagacaatggggttgactgctgacg 540
Query: 1225 aagctggttcgcctcctgactcgagcccttcgtcctcttgttcgtcatcaagccgcaaac 1284
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagctggctcgcctcctgactcgagcccttcgtcctcttgttcgtcatcaagccgcaaac 600
Query: 1285 gtgacagacatcgcgctcagcccaggaacaagaagagagatcgtaatatctcacctaata 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgacagacatcgcgctcagcccaggaacaagaagagagatcgtaatatctcacctaata 660
Query: 1345 gggattaaacagtttcgcagtaccaattcacgccatattggctgtttatattgaacctt 1403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gggattaaacagtttcgcagtaccaattcacgccatattggctgtttatattgaacctt 719
Score = 325 bits (164), Expect = 1e-88
Identities = 176/179 (98%), Gaps = 1/179 (0%)
Strand = Plus / Plus
Query: 1419 tttatattgaacctttatgcaatattttacaaatgtgtgactcaattgacgtttaaaaaa 1478
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 705 tttatattgaacctttatgcaatattttacaaatgtgtgactcaattgatgtttaaaa-a 763
Query: 1479 atctgtcatttacattcaaacagccaatgtggcgaaatatgacttgtcgattaaaataat 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 atctgtcatttacattcaaacagccaatgtggcgaaatatgacttgtcgattaaaataat 823
Query: 1539 atcttaaaaactagctattatagatatagcgtggaaatgtaatatatttaaatgaccag 1597
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 824 atcttaaaaactagctattatagatatagcgtngaaatgtaatatatttaaatgaccag 882
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,234
Number of extensions: 5071
Number of successful extensions: 5071
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5070
Number of HSP's successfully gapped: 2
Length of query: 1852
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1835
Effective length of database: 8,119,229
Effective search space: 14898785215
Effective search space used: 14898785215
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)