BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00104 (UTR included)
(1798 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3060_C1 1804 0.0
>BF14_3060_C1
Length = 930
Score = 1804 bits (910), Expect = 0.0
Identities = 925/930 (99%)
Strand = Plus / Plus
Query: 48 attttgttaactagtttaaatataaaataaatacgaatacgaaaaacgataaagatcaaa 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attttgttaactagtttaaatataaaataaatacgaatacgaaaaacgataaagatcaaa 60
Query: 108 atgtttaaattacttagtcgacacggccgtcgaatcggtattagaaatttattctgcgaa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtttaaattacttagtcgacacggccgtcgaatcggtattagaaatttattctgcgaa 120
Query: 168 aagcaaattgaggttaaaaaggcaagggtttattatttctattcttctgcgggttcagtt 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagcaaattgaggttaaaaaggcaagggtttattatttctattcttctgcgggttcagtt 180
Query: 228 cgatttgcttccaccggtgctgatgtagggaaaacaatatcattagaatctattcccgaa 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgatttgcttccaccggtgctgatgtagggaaaacaatatcattagaatctattcccgaa 240
Query: 288 ccccctcccgttcctgacaaatcagtcgttggtgatataacagaagctgttcaaagtttg 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccccctcccgttcctgacaaatcagtcgttggtgatataacagaagctgttcaaagtttg 300
Query: 348 gcagctaatggagaaccttcattcgcaagccttggacttggcggttggagcccagttggt 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcagctaatggagaaccttcattcgcaagccttggacttggcggttggagcccagttggt 360
Query: 408 atcgtacaaaactgtctcgaatatctgcatgtgtccctggatgtgccatggtggggagcc 467
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 attgtacaaaactgtctcgaatatctgcatgtctccctggatgtgccatggtggggagcc 420
Query: 468 atattaataggaactgttgttgtaagaactctcatgttccctcttgtcattatatctcag 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atattaataggaactgttgttgtaagaactctcatgttccctcttgtcattatatctcag 480
Query: 528 agaaacactgccaaaatgaataataatttacctgagatacaattacttcaaatgaagatg 587
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 agaaacactgccaaaatgaataataatttacctgagatacaattactacaaatgaagatg 540
Query: 588 tcacaggccagacagactggaaatcaattggagtcggctcggtacgctcaagagatgatg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcacaggccagacagactggaaatcaattggagtcggctcggtacgctcaagagatgatg 600
Query: 648 ttatttatgaaagaaaagggtttgaatcctttgagaaacatgattgtgccgcttgcacaa 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttatttatgaaagaaaagggtttgaatcctttgagaaacatgattgtgccgcttgcacaa 660
Query: 708 gcgccattatttatttcatttttcataggcttaagaggaatggcaaactgtcctgtagag 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcgccattatttatttcatttttcataggcttaagaggaatggcaaactgtcctgtagag 720
Query: 768 agtatgatgtctggtggtatgtggtggtttactgatttgactgttcctgatcagtttttc 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agtatgatgtctggtggtatgtggtggtttactgatttgactgttcctgatcagtttttc 780
Query: 828 atattgccactcataacaagtgctactatgtgggctacaattgaactaggagttgatggt 887
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 781 atattgccactcataacaagtgctactatgtgggctacaattgaactgggagttgatggt 840
Query: 888 ggcagattagaagcatcaaacatgcaaatgatgagatatttcttgagagcaattcccgta 947
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 841 ggcagattagaagcatcaaacatgcaaatgatgagatatttcttgagagcgattcccgta 900
Query: 948 atcatgatacccttcacaataaattttccc 977
||||||||||||||||||||||||||||||
Sbjct: 901 atcatgatacccttcacaataaattttccc 930
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,911
Number of extensions: 12296
Number of successful extensions: 12296
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12296
Number of HSP's successfully gapped: 1
Length of query: 1798
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1781
Effective length of database: 8,119,229
Effective search space: 14460346849
Effective search space used: 14460346849
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)