BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21075 (UTR included)
(2377 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A1D03 1306 0.0
>BF01051A1D03
Length = 790
Score = 1306 bits (659), Expect = 0.0
Identities = 694/706 (98%), Gaps = 3/706 (0%)
Strand = Plus / Plus
Query: 1 cccaatactcccctcgtaacgtagcgagaacaattaaaatttaaattaataggaagattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 cccaatactcccctcgtaacgtagcgagaacaattaaaatttaaattaataggaagattc 144
Query: 61 atcagtgacaaaataagcgatcggtgatcgagagcgacaggcacgtgcgtgcgattgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atcagtgacaaaataagcgatcggtgatcgagagcgacaggcacgtgcgtgcgattgtaa 204
Query: 121 atacggtacacaaaaagtgaacaca---aaactagtgaaaagttttttcgccacgcgcgg 177
||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 205 atacggtacacaaaaagtgccggcattgaaactagtgaaaagttttttcgccacgcgcgg 264
Query: 178 gggagaaccccctgttccggaaaaaatcgccccctcgcgtccctcgcgtccctcacccac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggagaaccccctgttccggaaaaaatcgccccctcgcgtccctcgcgtccctcacccac 324
Query: 238 ccaccgacgaacctttcattcaccgggaaaaaagtgtggcaaggccgtgtgacgtcaccg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaccgacgaacctttcattcaccgggaaaaaagtgtggcaaggccgtgtgacgtcaccg 384
Query: 298 tatctagtggccacgcgctcgttccctagcaacgagtcgcatctcacaggttctgcaaag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatctagtggccacgcgctcgttccctagcaacgagtcgcatctcacaggttctgcaaag 444
Query: 358 tgcaggatcgcgggtgttcagaaatgtcggcgattgtcggtgactccttccagtggatgt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgcaggatcgcgggtgttcagaaatgtcggcgattgtcggtgactccttccagtggatgt 504
Query: 418 gacaagtgtggagtggaaagtgcgatgtaggtgtgggcacagtggactctatgtgtagca 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gacaagtgtggagtggaaagtgcgatgtaggtgtgggcacagtggactctatgtgtagca 564
Query: 478 cgcagagagcgagggtgtcgaggatgcacttgacgagtgcctccagcggggccgtgtcgc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cgcagagagcgagggtgtcgaggatgcacttgacgagtgcctccagcggggccgtgtcgc 624
Query: 538 cggacaccagctccgcactcctccacgagacatacaccaagatgacatcagatatactcg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cggacaccagctccgcactcctccacgagacatacaccaagatgacatcagatatactcg 684
Query: 598 cggagaggacgctgggtgattttctatcggagcacccgggggaattggtgaggactggta 657
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 685 cggagaggacgctgggtgattttttatcggagcacccgnnngaattggtgaggactggta 744
Query: 658 gtccacacttcgtatgcacagtgctacctcctcactggcgatccaa 703
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 745 gtccacactttgtatgcacagtgctacctcctcactggcgatccaa 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,184
Number of extensions: 18542
Number of successful extensions: 18542
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18540
Number of HSP's successfully gapped: 2
Length of query: 2377
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2360
Effective length of database: 8,119,229
Effective search space: 19161380440
Effective search space used: 19161380440
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)