BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04396 (UTR included)
(3796 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2G03 1199 0.0
>BF01056B2G03
Length = 828
Score = 1199 bits (605), Expect = 0.0
Identities = 638/649 (98%)
Strand = Plus / Plus
Query: 2396 atgtagaggtgcctcattcccgttgacagcaccgaaacctatcatctctgagttagcgat 2455
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 atgtagaggtgcctcattcccgttgactgcaccgaaacctatcatctctgagttagcgat 60
Query: 2456 acagataccgttatgtgagttagatacggaaaaggcgcagtacgaggagcagttggtgcg 2515
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 acagataccgttatgtgagttagatacggaaaaggcgcagtacgaggagcagttagtgcg 120
Query: 2516 atgggcgcatatgacgtcagatgttgacattaaaaccgccagagagaccgccttgaaatt 2575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgggcgcatatgacgtcagatgttgacattaaaaccgccagagagaccgccttgaaatt 180
Query: 2576 gtttgctttggcgtgtcgcagtgaaatagagcaaagggcgttggaactaatggaattatt 2635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtttgctttggcgtgtcgcagtgaaatagagcaaagggcgttggaactaatggaattatt 240
Query: 2636 gagagacgatcgtctgatacctctcgctgcgaaatacgcgtcgcggctagggcggataca 2695
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagagacgatcgtctgttacctctcgctgcgaaatacgcgtcgcggctagggcggataca 300
Query: 2696 tctcgctgagaaattaacgagcctcgctgagacctgggagagtgacgcgagtaaggttaa 2755
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctcgctgagaaattaacgagcctcgctgagacctgggagagtgacgcgagtaaggttaa 360
Query: 2756 cgaagcccaaacgacgcacttccgagagctggacacacaggaaacttatgacgtcacaga 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgaagcccaaacgacgcacttccgagagctggacacacaggaaacttatgacgtcacaga 420
Query: 2816 acaacacgaggacctgaacacgagcttaataataccacagaaaacaacgaaaaagaaaga 2875
||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| ||
Sbjct: 421 acaacacgaggacctgaacacgagcctgataataccacagaaaacagcgaaaaagaagga 480
Query: 2876 gacggaaactgctttaaaacctgtaccaatcaaatcatcgcccggcggcgccaggaatcc 2935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gacggaaactgctttaaaacctgtaccaatcaaatcatcgcccggcggcgccaggaatcc 540
Query: 2936 atttaagaaacatctagataacaaacctagccagagtccactcagcctcacagaacgaac 2995
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atttaaaaaacatctagataacaaacctagccagagtccactcagcctcacagaacgaac 600
Query: 2996 gctggtcgaagtacatcaacaacaaactgacgataccgaaaacagtgac 3044
|||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 601 gctggtcgaagtacatcaacaacaaactgacgatactgaaaatagtgac 649
Score = 220 bits (111), Expect = 1e-56
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 3045 tctctaaaaccggcagacggtgagacgtttgtagaatggttttcaaggaacaagtccata 3104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tctctaaaaccggcagacggtgagacgtttgtagaatggttttcaaggaacaagtccata 777
Query: 3105 ttagaaaaacaaaatccggatcttacacccgcggaattaacgagacactgc 3155
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ttagaaaaacaaaatccggatcttacacccgcggaattaacgagacactgc 828
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 421,245
Number of extensions: 20416
Number of successful extensions: 20416
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20416
Number of HSP's successfully gapped: 2
Length of query: 3796
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3778
Effective length of database: 8,109,745
Effective search space: 30638616610
Effective search space used: 30638616610
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)