BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21443 (UTR included)
(2704 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1167_C1 628 e-179
BF01019A1H08 94 1e-18
BF01014B2F02 74 1e-12
BF01049B1F01 68 8e-11
BF14_335_C4 68 8e-11
>BF14_1167_C1
Length = 1336
Score = 628 bits (317), Expect = e-179
Identities = 324/325 (99%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 2381 agtcaagttttcagtgccactgatattttaaactacagacaaggtaaacgaatactgcca 2440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 agtcaagttttcagtgccactgatattttaaactacagacaaggtaaacgaatactgcca 72
Query: 2441 cacagaaaacttgttagtttatgatgacagcaaaacaaaagtgcaattatgaaatactca 2500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cacagaaaacttgttagtttatgatgacagcaaaacaaaagtgcaattatgaaatactca 132
Query: 2501 agattgtgagaattttgtaaatatagtatagatatagacgaatgataagtaaagctatgt 2560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agattgtgagaattttgtaaatatagtatagatatagacgaatgataagtaaagctatgt 192
Query: 2561 gtgatggtagctc-ttttttttataataaaatgtgtttttttttccagacagtattttta 2619
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gtgatggtagctctttttttttataataaaatgtgtttttttttccagacagtattttta 252
Query: 2620 ataaaaccggtactacacgtaatccaccgcaataaagacacatatcaaatgttaaatttg 2679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ataaaaccggtactacacgtaatccaccgcaataaagacacatatcaaatgttaaatttg 312
Query: 2680 tacatagataatatagaattaatag 2704
|||||||||||||||||||||||||
Sbjct: 313 tacatagataatatagaattaatag 337
>BF01019A1H08
Length = 504
Score = 93.7 bits (47), Expect = 1e-18
Identities = 94/108 (87%), Gaps = 5/108 (4%)
Strand = Plus / Plus
Query: 839 cattccatggattcaccatgcgggtgccgggtcca---ggttgaagggagagaagcttca 895
||||| ||||||||||| ||||||||||||||||| |||| |||||||| |||||||
Sbjct: 381 cattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcagggagaggagcttca 440
Query: 896 aca--gcccgggacttgcgacccaggtgtagctttaaggggcccctat 941
||| ||| |||| ||||||||||||||||| |||||||||| |||||
Sbjct: 441 acagtgcctgggagttgcgacccaggtgtaggtttaaggggctcctat 488
>BF01014B2F02
Length = 623
Score = 73.8 bits (37), Expect = 1e-12
Identities = 86/100 (86%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 827 gaaacctctcttcattccatggattcaccatgcgggtgccgggtccag-gttgaagggag 885
|||||||||| ||||| ||||| |||| |||||||||||||||||| |||| ||||||
Sbjct: 524 gaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtccagcgttgcagggag 583
Query: 886 agaagcttcaaca--gcccgggacttgcgacccaggtgta 923
|| ||||||| || ||| ||||||||||||||||||||
Sbjct: 584 aggagcttcagcagcgcctaggacttgcgacccaggtgta 623
>BF01049B1F01
Length = 840
Score = 67.9 bits (34), Expect = 8e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 875 gttgaagggagagaagcttcaacag--cccgggacttgcgacccaggtgtagctttaagg 932
|||| |||||||| ||||||||||| || |||||||||||||||||||||| | |||||
Sbjct: 588 gttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtgtaagg 647
Query: 933 ggccc 937
|||||
Sbjct: 648 ggccc 652
>BF14_335_C4
Length = 1491
Score = 67.9 bits (34), Expect = 8e-11
Identities = 52/57 (91%), Gaps = 2/57 (3%)
Strand = Plus / Minus
Query: 882 ggagagaagcttcaacag--cccgggacttgcgacccaggtgtagctttaaggggcc 936
|||||| ||||||||||| || |||||||||||||||||||||| |||||||||||
Sbjct: 1302 ggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtttaaggggcc 1246
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 329,177
Number of extensions: 20140
Number of successful extensions: 20140
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 20134
Number of HSP's successfully gapped: 5
Length of query: 2704
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2687
Effective length of database: 8,119,229
Effective search space: 21816368323
Effective search space used: 21816368323
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)