BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18972 (UTR included)
(3115 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B1C07 1503 0.0
BF01062B1H08 821 0.0
BF14_1934_C1 76 4e-13
>BF01040B1C07
Length = 786
Score = 1503 bits (758), Expect = 0.0
Identities = 774/780 (99%)
Strand = Plus / Plus
Query: 1035 cctctgtcagtgctcgccaaaccccccgacatacatcgtcctgatgataagggcaatggt 1094
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7 cctctgtcagtgctcgccaaaccccccgacatacaccgtcctgatgataagggcaatggt 66
Query: 1095 atcagctcggcggaagagcgacacagaaattcaatatccccgggcgagagagagaaatat 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atcagctcggcggaagagcgacacagaaattcaatatccccgggcgagagagagaaatat 126
Query: 1155 agaacaaggagtcccgctgaaccagatcacaagaaactaaaaaaggaggaaaaagatatg 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 agaacaaggagtcccgctgaaccagatcacaagaaactaaaaaaggaggaaaaagatatg 186
Query: 1215 ggacatgaattagttgtagacgacgccagcgaagaacccacatcacctcacaacggggcg 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ggacatgaattagttgtagacgacgccagcgaagaacccacatcacctcacaacggggcg 246
Query: 1275 ccttcacccagagagaacggtctggacaaacttcaacccaagaaagaacatccccctcac 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccttcacccagagagaacggtctggacaaacttcaacccaagaaagaacatccccctcac 306
Query: 1335 agtccgcggtctggaacgtccagtaacgcatcgacgccttcgacaaaaaagttagacgag 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agtccgcggtctggaacgtccagtaacgcatcgacgccttcgacaaaaaagttagacgag 366
Query: 1395 aaacccagcacgccgatttcaaaaccggtgacgccgacttccggcgctagtggcgtcggc 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaacccagcacgccgatttcaaaaccggtgacgccgacttccggcgctagtggcgtcggc 426
Query: 1455 tcggcggggccacctatgaaggcggcggtgaagcccccggcgttacagtacccctaccta 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tcggcggggccacctatgaaggcggcggtgaagcccccggcgttacagtacccctaccta 486
Query: 1515 ggtaacggggcccacgacgcatacggacttgccggatattcagccagagcggcgatggcg 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ggtaacggggcccacgacgcatacggacttgccggatattcagccagagcggcgatggcg 546
Query: 1575 tacgagccactacgtcccccaataggaccagcggctctggcacccatacctggcggaaaa 1634
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tatgagccactacgtccgccaataggaccagcggctctggcacccatacctggcggaaaa 606
Query: 1635 ccagcgtactcgttccacgtatcggccgagggccagatgcaaccggtcccattccccccg 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ccagcgtactcgttccacgtatcggccgagggccagatgcaaccggtcccattccccccg 666
Query: 1695 gacgccctcatggggccggggatcccccgccacgcgcggcaggtgtccgccctcgcccac 1754
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 667 gacgccctcatggggccggggatcccccgccacgcgcggcanntgtccgccctcgcccac 726
Query: 1755 ggggaagtggtgtgcgcggtgacagtctcctcgccaaccaagtacgtgtacaccggcggt 1814
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggggaggtggtgtgcgcggtgacagtctcctcgccaaccaagtacgtgtacaccggcggt 786
>BF01062B1H08
Length = 706
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 2456 ggacaacctgctcaacgcctggcgcacgccctacggggcgagcatcttccagtctaagga 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ggacaacctgctcaacgcctggcgcacgccctacggggcgagcatcttccagtctaagga 330
Query: 2516 gtcgtcgtcggtgctgagctgcgacatctcatcggacgacaagtacatagtgaccgggtc 2575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtcgtcgtcggtgctgagctgcgacatctcatcggacgacaagtacatagtgaccgggtc 390
Query: 2576 aggcgacaagaaggccacagtgtacgaagtgatctactaacatagtgacagacaaacata 2635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aggcgacaagaaggccacagtgtacgaagtgatctactaacatagtgacagacaaacata 450
Query: 2636 cagtgtagtgatagcgggacgttccgcgcgcgagtgatatggcttagtgtatgtatagtg 2695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cagtgtagtgatagcgggacgttccgcgcgcgagtgatatggcttagtgtatgtatagtg 510
Query: 2696 ttgtatgaaggctgtatgtacttatgcgacctgtttatatagagttagtgtacgcggtca 2755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttgtatgaaggctgtatgtacttatgcgacctgtttatatagagttagtgtacgcggtca 570
Query: 2756 tgtttatttgttgagcgcccgtagtgtatgttggcggcagatctcaaaatgatgatttcg 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgtttatttgttgagcgcccgtagtgtatgttggcggcagatctcaaaatgatgatttcg 630
Query: 2816 tttcaatattgttgtaaatggctcatattaaagaaatgatatgcgcgaattata 2869
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tttcaatattgttgtaaatggctcatattaaagaaatgatatgcgcgaattata 684
>BF14_1934_C1
Length = 528
Score = 75.8 bits (38), Expect = 4e-13
Identities = 164/206 (79%)
Strand = Plus / Plus
Query: 2394 gagtcctgtgtactttccctcaggttcgcctcctgcgggaagtggttcgtctccacgggg 2453
|||||||| || || || || |||||||| || |||| || |||||||||||||| |||
Sbjct: 230 gagtcctgcgtgctgtcactgaggttcgcagccagcggcaaatggttcgtctccactggg 289
Query: 2454 aaggacaacctgctcaacgcctggcgcacgccctacggggcgagcatcttccagtctaag 2513
||||||||| | | ||||| ||||| || || ||||| || || || |||||||| |||
Sbjct: 290 aaggacaacttattgaacgcgtggcggacaccttacggagctagtatattccagtcaaag 349
Query: 2514 gagtcgtcgtcggtgctgagctgcgacatctcatcggacgacaagtacatagtgaccggg 2573
|| || || ||||||||||| || || || || ||||| || |||| ||||| || ||
Sbjct: 350 gaatcatcttcggtgctgagttgtgatatatcttcggatgataagttcatagcaacgggt 409
Query: 2574 tcaggcgacaagaaggccacagtgta 2599
|| |||||||| ||||| ||||||||
Sbjct: 410 tccggcgacaaaaaggctacagtgta 435
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,216
Number of extensions: 8883
Number of successful extensions: 8883
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8883
Number of HSP's successfully gapped: 3
Length of query: 3115
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3097
Effective length of database: 8,109,745
Effective search space: 25115880265
Effective search space used: 25115880265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)