BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN00573 (UTR included)
         (3439 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_335_C2                                                            92   7e-18
BF01031B2E06                                                           72   6e-12

>BF14_335_C2
          Length = 1827

 Score = 91.7 bits (46), Expect = 7e-18
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 879  acggttccttgggaaaccaacatccccaaagaccatgtcatcaaggtcaacaagttttac 938
            |||||||||||| | ||||||||||||||| |||||| ||||||||||||||||| ||| 
Sbjct: 1227 acggttccttggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattat 1168

                      
Query: 939  gagctcacta 948
            ||||||||||
Sbjct: 1167 gagctcacta 1158


>BF01031B2E06
          Length = 707

 Score = 71.9 bits (36), Expect = 6e-12
 Identities = 55/60 (91%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                       
Query: 891 gaaaccaacatccccaaagaccatgtcatcaaggtcaacaagttttacg-agctcactaa 949
           ||||||||||||||||||||||||| ||||||| |||| |||| ||||| ||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 416,054
Number of extensions: 9176
Number of successful extensions: 9176
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9176
Number of HSP's successfully gapped: 2
Length of query: 3439
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3421
Effective length of database: 8,109,745
Effective search space: 27743437645
Effective search space used: 27743437645
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)