BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22439 (UTR included)
(2170 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1F10 1481 0.0
BF14_197_C1 1350 0.0
BF01002X1A12 381 e-105
BF01015A1F04 200 7e-51
>BF01033A1F10
Length = 782
Score = 1481 bits (747), Expect = 0.0
Identities = 759/763 (99%)
Strand = Plus / Plus
Query: 1171 tcacactggaaggtattaaacagttcttcatctcaattgatattgaagattggaaattgg 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacactggaaggtattaaacagttcttcatctcaattgatattgaagattggaaattgg 60
Query: 1231 acacactctgtgacttgtatgatactctttctatcgcccaagccgtcatcttctgtaaca 1290
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61 acacactctgtgacttgtacgatactctttctatcgctcaagccgtcatcttctgtaaca 120
Query: 1291 cacgtcgcaaggtcgactggctgaccgagtccatgcatcagcgtgatttcacggtatctg 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacgtcgcaaggtcgactggctgaccgagtccatgcatcagcgtgatttcacggtatctg 180
Query: 1351 ccatgcacggtgacatggaccagcgcgagcgtgaagtgatcatgcgtcagttccgcacag 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 ccatgcacggtgacatggaccagcgcgagcgtgaagtgatcatgcgtcagttccgtacag 240
Query: 1411 gctcgtcccgtgtactgatcacaaccgatctgttggcgcgaggcatcgacgtgcagcaag 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctcgtcccgtgtactgatcacaaccgatctgttggcgcgaggcatcgacgtgcagcaag 300
Query: 1471 tgtcctgcgtcatcaactacgatctacccaccaaccgagagaattacatccatcgtatcg 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtcctgcgtcatcaactacgatctacccaccaaccgagagaattacatccatcgtatcg 360
Query: 1531 gacgaggtggtcgtttcggtcgtaaggggatcgccatcaactttgtgactgaagctgaca 1590
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 361 gacgaggtggtcgtttcggtcgtaaggggatcgccatcaactttgtgaccgaagctgaca 420
Query: 1591 agagggcgctgaaggatatcgaggagttttaccatactactattacggaaatgcccaacg 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagggcgctgaaggatatcgaggagttttaccatactactattacggaaatgcccaacg 480
Query: 1651 atgtggctaacctcatctgaggtggcggcgcattccactttataatttgtgtcctgcatt 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgtggctaacctcatctgaggtggcggcgcattccactttataatttgtgtcctgcatt 540
Query: 1711 ctattgcgatatttaaacggtgtgagtattaggagcagcctcctaactaccgctgtgctg 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctattgcgatatttaaacggtgtgagtattaggagcagcctcctaactaccgctgtgctg 600
Query: 1771 tttttttattggaacgtttaatttggaccgatactttattttagtttaatgaaataatta 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttttttattggaacgtttaatttggaccgatactttattttagtttaatgaaataatta 660
Query: 1831 ctagtactatcatagacgtatctatataagtttaatctacatagaataagcccggcccgg 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctagtactatcatagacgtatctatataagtttaatctacatagaataagcccggcccgg 720
Query: 1891 ccggatggcccccgttccgcttggccctccctgctacctgcag 1933
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccggatggcccccgttccgcttggccctccctgctacctgcag 763
>BF14_197_C1
Length = 686
Score = 1350 bits (681), Expect = 0.0
Identities = 684/685 (99%)
Strand = Plus / Plus
Query: 443 ggaggatcctaagaatgggccgtcaaaggatcaaggcagttacgatggacctccgggtat 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaggatcctaagaatgggccgtcaaaggatcaaggcagttacgatggacctccgggtat 61
Query: 503 ggagcccggcggcgccctcgacacaaactggcatgaagtcgtggaaagctttgatgacat 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggagcccggcggcgccctcgacacaaactggcatgaagtcgtggaaagctttgatgacat 121
Query: 563 gaagttgaaagaggaattgttgcgaggaatttacgcttacggttttgagaaaccttcagc 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaagttgaaagaggaattgttgcgaggaatttacgcttacggttttgagaaaccttcagc 181
Query: 623 catccaacaacgcgcaatcatgccctgcatcaagggtcgtgacgttatagctcaagccca 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catccaacaacgcgcaatcatgccctgcatcaagggtcgtgacgttatagctcaagccca 241
Query: 683 gtctggtactggcaaaactgctactttctcaatttcgattctacaacatattgatactag 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtctggtactggcaaaactgctactttctcaatttcgattctacaacatattgatactag 301
Query: 743 tgttcgcgagtgtcaagctttgattttagctccgactcgggaattagctcaacaaattca 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgttcgcgagtgtcaagctttgattttagctccgactcgggaattagctcaacaaattca 361
Query: 803 gaaggttgtgattgccctgggtgatcatctgaatgctaagtgccatgcttgtatcggtgg 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaaggttgtgattgccctgggtgatcatctgaatgctaagtgccatgcttgtatcggtgg 421
Query: 863 tactaatgtacgtgaggatatacgtcagctggagagtggtgtccatgttgttgtgggcac 922
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tactaatgtacgtgaagatatacgtcagctggagagtggtgtccatgttgttgtgggcac 481
Query: 923 ccctggtcgtgtatatgatatgatcactcgtcgggcactccgcgctaacacgattaagct 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccctggtcgtgtatatgatatgatcactcgtcgggcactccgcgctaacacgattaagct 541
Query: 983 gtttgtgctcgacgaggctgatgaaatgttgtcaagaggatttaaagatcaaatccatga 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtttgtgctcgacgaggctgatgaaatgttgtcaagaggatttaaagatcaaatccatga 601
Query: 1043 tgtcttcaagatgttgtcatctgatgttcaagtcattttgctatctgctactatgcctga 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgtcttcaagatgttgtcatctgatgttcaagtcattttgctatctgctactatgcctga 661
Query: 1103 tgatgtgttagaggtctcccgctgc 1127
|||||||||||||||||||||||||
Sbjct: 662 tgatgtgttagaggtctcccgctgc 686
>BF01002X1A12
Length = 337
Score = 381 bits (192), Expect = e-105
Identities = 192/192 (100%)
Strand = Plus / Plus
Query: 1538 tggtcgtttcggtcgtaaggggatcgccatcaactttgtgactgaagctgacaagagggc 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tggtcgtttcggtcgtaaggggatcgccatcaactttgtgactgaagctgacaagagggc 108
Query: 1598 gctgaaggatatcgaggagttttaccatactactattacggaaatgcccaacgatgtggc 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gctgaaggatatcgaggagttttaccatactactattacggaaatgcccaacgatgtggc 168
Query: 1658 taacctcatctgaggtggcggcgcattccactttataatttgtgtcctgcattctattgc 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 taacctcatctgaggtggcggcgcattccactttataatttgtgtcctgcattctattgc 228
Query: 1718 gatatttaaacg 1729
||||||||||||
Sbjct: 229 gatatttaaacg 240
>BF01015A1F04
Length = 319
Score = 200 bits (101), Expect = 7e-51
Identities = 158/177 (89%)
Strand = Plus / Minus
Query: 1555 aggggatcgccatcaactttgtgactgaagctgacaagagggcgctgaaggatatcgagg 1614
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 319 aggggatccccatcaactttgtgactgaagctgccaagagggcgctgaaggatatcgggg 260
Query: 1615 agttttaccatactactattacggaaatgcccaacgatgtggctaacctcatctgaggtg 1674
|||||| |||||||||||||||||||||||||| ||||| ||||| |||| | || || |
Sbjct: 259 agttttcccatactactattacggaaatgcccaccgatggggctaccctcttttgggggg 200
Query: 1675 gcggcgcattccactttataatttgtgtcctgcattctattgcgatatttaaacggt 1731
| |||||||||| ||||| ||||||||||| | || ||||||||||||||| ||||
Sbjct: 199 ggggcgcattcccctttaaaatttgtgtccccccttttattgcgatatttaaccggt 143
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,976
Number of extensions: 3406
Number of successful extensions: 3406
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3406
Number of HSP's successfully gapped: 4
Length of query: 2170
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2153
Effective length of database: 8,119,229
Effective search space: 17480700037
Effective search space used: 17480700037
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)