BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03392 (UTR included)
(6136 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1565_C1 2169 0.0
>BF14_1565_C1
Length = 1130
Score = 2169 bits (1094), Expect = 0.0
Identities = 1121/1130 (99%)
Strand = Plus / Plus
Query: 4241 ttacctgtcttggaggggattccagtatctgaggttggacggtatgacgaaagccgagga 4300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttacctgtcttggaggggattccagtatctgaggttggacggtatgacgaaagccgagga 60
Query: 4301 tcgtggggaactgctgaagaagttcaacgacgtgggctctgattactttatcttcttgtt 4360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtggggaactgctgaagaagttcaacgacgtgggctctgattactttatcttcttgtt 120
Query: 4361 gtcgactcgtgccggaggtctgggcctcaacctgcagagcgctgatactgttatcatctt 4420
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcgactcgcgccgtaggtctgggcctcaacctgcagagcgctgatactgttatcatctt 180
Query: 4421 tgactctgattggaatccccatcaggatctacaagcacaagatcgagcacatcgtatagg 4480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgactctgattggaatccccatcaggatctacaagcacaagatcgagcacatcgtatagg 240
Query: 4481 acagcgaaacgaagtgcgcgttctacgtctcatgacggtgaactctgttgaagaaagaat 4540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagcgaaacgaagtgcgcgttctacgtctcatgacggtgaactctgttgaagaaagaat 300
Query: 4541 tttagcagctgccagatacaaactgaatatggacgagaaggttattcaagctggtatgtt 4600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttagcagctgccagatacaaactgaatatggacgagaaggttattcaagctggtatgtt 360
Query: 4601 cgatcagaagtccaccggatctgagcgacaacagttcctgcagagcatactacatcaaga 4660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgatcagaagtccaccggatctgagcgacaacagttcctgcagagcatactacatcaaga 420
Query: 4661 cggagacgatgaagaggaggagaacgaagtgccagacgacgacttgatcaatgaaatgat 4720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggagacgatgaagaggaggagaacgaagtgccagacgacgacttgatcaatgaaatgat 480
Query: 4721 agcacgctccgaagaagaattggagatattcagacggattgatctcgagcgcaaaaagac 4780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 481 agcacgctccgaagaagaattggagatattcagacggattgatctcgagcgcaagaagac 540
Query: 4781 tgagacacagacgcggctcattgacgaatcagagctacctgactggctggtgaagaccga 4840
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 tgagacacagacgcggctcattgacgaatcagagctgcctgactggctggtgaagaccga 600
Query: 4841 tgacgaggttgtgtgtaataagggccaaggttggaattatccagacgaggatgagacact 4900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgacgaggttgtgtgtaataagggccaaggttggaattatccagacgaggatgagacact 660
Query: 4901 cggtcgcggatcgagacaacgcaaggaggtcgactacaccgactcactcactgagaaaga 4960
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cggtcgcggatcgagacagcgcaaggaggtcgactacaccgactcactcactgagaaaga 720
Query: 4961 tctcctgcaggctattgacgaagatatggacgaagaagacgacgacgacgatgacgatga 5020
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tctcctgcaggctatagacgaagatatggacgaagaagacgacgacgacgatgacgatga 780
Query: 5021 ggtgttggataagaagaggcggcggggaaggaagcgacgacggaatcaagatgattctga 5080
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 781 ggtgttggataagaagaggcggcgggggaggaagcgacgacggaatcaagatgattctga 840
Query: 5081 tgaagacgaagtgccgtgcacctcgaggagaaaaagcaaaactgaacttaatcagctcaa 5140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgaagacgaagtgccgtgcacctcgaggagaaaaagcaaaactgaacttaatcagctcaa 900
Query: 5141 gaaacgtttgaagaatattatgaaaaaagtcattgattattctgacgagaatggtcgcgt 5200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaaacgtttgaagaatattatgaaaaaagtcattgattattctgacgagaatggtcgcgt 960
Query: 5201 actatcagaaccgtttatgaagctgccgtctcgtcgtgaacttcccgattattatgatgt 5260
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 961 actatcagaaccgtttatgaagctgccgtctcgtcgtgaacttcccgattactatgatgt 1020
Query: 5261 cattaaaaaaccgctcgacattaagaagattatgaacaggatcgaggatggaaagtacac 5320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1021 cattaaaaaaccgctcgacattaagaagattatgaacaggatcgaggatggaaagtatac 1080
Query: 5321 tgacatatcagacttggagcgggatttcttcactctgtgtgcaaacgctc 5370
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tgacatatcagacttggagcgggatttcttcactctgtgtgcaaacgctc 1130
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 82,894
Number of extensions: 9575
Number of successful extensions: 9575
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9573
Number of HSP's successfully gapped: 1
Length of query: 6136
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6118
Effective length of database: 8,109,745
Effective search space: 49615419910
Effective search space used: 49615419910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)