BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05457 (UTR included)
(1423 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B2D04 563 e-160
BF01004X1C05 289 6e-78
>BF01053B2D04
Length = 369
Score = 563 bits (284), Expect = e-160
Identities = 293/296 (98%)
Strand = Plus / Plus
Query: 847 gtacggacactagcaggtgtcagcacgcggagcttccttatgaaagtaacaagaaattga 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 gtacggacactagcaggtgtcagcacgcggagcttccttatgaaagtaacaagaaattga 104
Query: 907 atgtcatgtcagtttaagttttctaataaactcacttcatataataattgttaattattt 966
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 105 atgtcatgtcagtttaagttttctaataaactcgcttcatataataattgttaattattt 164
Query: 967 gactggaaatgtaataaaacacaaaaatatcgaacaggaactgaagaggtttaaccaatt 1026
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 165 gactggaaatgtaataaaacacaaaaatatcgaacaggaactggagagatttaaccaatt 224
Query: 1027 acttctttaatatgaattaattctttgagttccaacatctgtgtgcacggttgtattacc 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 acttctttaatatgaattaattctttgagttccaacatctgtgtgcacggttgtattacc 284
Query: 1087 atcgctgtctttgatctgagcaataaacttgaacataataaaaatatttgagccgc 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atcgctgtctttgatctgagcaataaacttgaacataataaaaatatttgagccgc 340
>BF01004X1C05
Length = 745
Score = 289 bits (146), Expect = 6e-78
Identities = 149/150 (99%)
Strand = Plus / Minus
Query: 1274 caattatttcactaaattgaatttttacatacactattccgtatgggaatatcacaaaag 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caattatttcactaaattgaatttttacatacactattccgtatgggaatatcacaaaag 686
Query: 1334 ccagtctcccgaccggcccatacatctccaacaagtatattacagacagtagtaaatgat 1393
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccagtctcccgaccagcccatacatctccaacaagtatattacagacagtagtaaatgat 626
Query: 1394 gcgcatcgttccgtccgcgagccgactccg 1423
||||||||||||||||||||||||||||||
Sbjct: 625 gcgcatcgttccgtccgcgagccgactccg 596
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,992
Number of extensions: 9673
Number of successful extensions: 9673
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9673
Number of HSP's successfully gapped: 3
Length of query: 1423
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1406
Effective length of database: 8,119,229
Effective search space: 11415635974
Effective search space used: 11415635974
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)