BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01010 (UTR included)
(2614 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 139 3e-32
BF14_335_C4 131 6e-30
BF14_335_C2 111 6e-24
BF01049B1F01 98 9e-20
BF01014B2F02 80 2e-14
BF14_2442_C1 80 2e-14
BF01044B1A07 78 8e-14
BF01016A2B02 78 8e-14
BF01056B2D01 76 3e-13
>BF01019A1H08
Length = 504
Score = 139 bits (70), Expect = 3e-32
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 501 atgagacgaaccctcttagcaatccatggattcaccgtgcgattgctggatccatcgcgt 560
|||||| ||| |||||||||| || |||||||||||||||| ||| || ||||||||||
Sbjct: 362 atgagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgt 421
Query: 561 tgcagggataggagcttcaacagtgcctgggacttgcgacccaggtgtag 610
|||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 422 tgcagggagaggagcttcaacagtgcctgggagttgcgacccaggtgtag 471
>BF14_335_C4
Length = 1491
Score = 131 bits (66), Expect = 6e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 501 atgagacgaaccctcttagcaatccatggattcaccgtgcgattgctggatccatcgcgt 560
|||||||||| |||| |||| ||||||||||||||||||| |||| || |||||||||
Sbjct: 1366 atgagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgt 1307
Query: 561 tgcagggataggagcttcaacagtgcctgggacttgcgacccaggtgtag 610
|||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 tgcagg-agaggagcttcaacagtgcctgggacttgcgacccaggtgtag 1258
>BF14_335_C2
Length = 1827
Score = 111 bits (56), Expect = 6e-24
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 503 gagacgaaccctcttagcaatccatggattcaccgtgcgattgctggatccatcgcgttg 562
|||||||| ||||||||| || |||||||||||||||| ||| || ||| |||||||
Sbjct: 808 gagacgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgttg 867
Query: 563 cagggataggagcttcaacagtgcctgggacttgcgacccaggtgtag 610
|||||| ||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 868 cagggagaggagcttcaacagtgcctgggatttgcgacacaggtgtag 915
>BF01049B1F01
Length = 840
Score = 97.6 bits (49), Expect = 9e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 558 cgttgcagggataggagcttcaacagtgcctgggacttgcgacccaggtgtag 610
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtag 639
>BF01014B2F02
Length = 623
Score = 79.8 bits (40), Expect = 2e-14
Identities = 91/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 503 gagacgaaccctcttagcaatccatggattcaccgtgcgattgctggatccatcgcgttg 562
|||||||| ||||| |||| || ||||| ||||||||| ||| || |||| ||||||
Sbjct: 519 gagacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtcca--gcgttg 576
Query: 563 cagggataggagcttcaacagtgcctgggacttgcgacccaggtgta 609
|||||| |||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 577 cagggagaggagcttcagcagcgcctaggacttgcgacccaggtgta 623
>BF14_2442_C1
Length = 801
Score = 79.8 bits (40), Expect = 2e-14
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 506 acgaaccctcttagcaatccatggattcaccgtgcgattgctggatccatcgcgttgcag 565
||||| |||||||||| ||||||||||||||||| | |||||||||| || ||||||||
Sbjct: 743 acgaaacctcttagcattccatggattcaccgtgtggttgctggatcaat--cgttgcag 686
Query: 566 ggataggagcttcaacagt 584
||| ||||||||| |||||
Sbjct: 685 ggagaggagcttcgacagt 667
>BF01044B1A07
Length = 806
Score = 77.8 bits (39), Expect = 8e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 526 atggattcaccgtgcgattgctggatccatcgcgttgcagggataggagcttcaacagtg 585
|||||||||||||||| || || |||||||||| ||||||| |||||||||||| |||
Sbjct: 450 atggattcaccgtgcgggtggcgggtccatcgcgtggcagggagaggagcttcaactgtg 509
Query: 586 cctgggacttgcgacccaggtgt 608
|||||||| |||| ||||||||
Sbjct: 510 tctgggactcgcgaaccaggtgt 532
>BF01016A2B02
Length = 780
Score = 77.8 bits (39), Expect = 8e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 556 cgcgttgcagggataggagcttcaacagtgcctgggacttgcgacccaggtgtag 610
||||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 222 cgcgttgaagggagaggagcttcaacagtgcctgggaattgcgactcaggtgtag 276
>BF01056B2D01
Length = 728
Score = 75.8 bits (38), Expect = 3e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 504 agacgaaccctcttagcaatccatggattcaccgtgcgattgctggatccatcgcgttgc 563
||||||| ||||| | || |||||| |||||||||||| ||| || |||||| | ||||
Sbjct: 77 agacgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgc 136
Query: 564 agggataggagcttcaacagtgcctgggac 593
||||| |||||||||||||| |||||||||
Sbjct: 137 agggagaggagcttcaacagcgcctgggac 166
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,960
Number of extensions: 7061
Number of successful extensions: 7061
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 7059
Number of HSP's successfully gapped: 9
Length of query: 2614
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2597
Effective length of database: 8,119,229
Effective search space: 21085637713
Effective search space used: 21085637713
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)