BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20084 (UTR included)
(1585 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01004X1C07 1451 0.0
>BF01004X1C07
Length = 792
Score = 1451 bits (732), Expect = 0.0
Identities = 756/764 (98%)
Strand = Plus / Plus
Query: 431 attccatgcgtgattactaaatcacaaatagttttataattacttaatatagtgtacaaa 490
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 attccatgcgtgattactagatcacaaatagttttataattacttaatatagtgtacaaa 88
Query: 491 aaaatcgaaaatgtcgttacttagtgatatattaccgataaacaagaatgaagacaaaaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaaatcgaaaatgtcgttacttagtgatatattaccgataaacaagaatgaagacaaaaa 148
Query: 551 caaacaagctagcgcaagtctctccccatatttaaactttgaccctaactatataccaaa 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 caaacaagctagcgcaagtctctccccatatttaaactttgaccctaactatataccaaa 208
Query: 611 aatgcaaccagaattcctttatcctgatgagagtcatatggcttcgactgcgagacgttc 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aatgcaaccagaattcctttatcctgatgagagtcatatggcttcgactgcgagacgttc 268
Query: 671 aaatgtagctcttcctattatcggcatgtcctttatgacaggatcaggtatgggaggaat 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaatgtagctcttcctattatcggcatgtcctttatgacaggatcaggtatgggaggaat 328
Query: 731 ggcaggtctctacaaaggattacgagcgaccacactagctggacagactggcaaagtccg 790
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 329 ggcaggtctctacaaaggattacgagcgactacactcgctggacagactggcaaagtccg 388
Query: 791 ccgaacacaactaattaattatataatgaaacagggtactacgactgggtgtacccttgg 850
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ccgaacacaattaattaattatataatgaaacagggtactacgactgggtgtacccttgg 448
Query: 851 tattctcgcgtccttctactcaaccctggccctaggagtcacctggttacgagaccagga 910
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 449 tattctcgcgtccttctactcaaccctggccctaggagtaacctggttacgagaccagga 508
Query: 911 ggacacagccaacacatttatagcggcaaccgctaccggcatgttgtacaagagtacctc 970
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 509 ggacacagccaacacatttatagcggcaaccgctaccggcatgttatacaagagcacctc 568
Query: 971 tggactccgttctatgggcctgggcgctgttgctggcctcaccttagcagggatatacac 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tggactccgttctatgggcctgggcgctgttgctggcctcaccttagcagggatatacac 628
Query: 1031 attggtcaccgataatgataatatttggagtaaggcgagatatataagaatgtgaagtca 1090
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tttggtcaccgataatgataatatttggagtaaggcgagatatataagaatgtgaagtca 688
Query: 1091 gattttacctaattgtaaatattagttattttaattcgttacgaaatttccaccgatgga 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gattttacctaattgtaaatattagttattttaattcgttacgaaatttccaccgatgga 748
Query: 1151 tctaccgagcgcttggggcttatttcccatgtcccaacactggt 1194
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tctaccgagcgcttggggcttatttcccatgtcccaacactggt 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,835
Number of extensions: 3963
Number of successful extensions: 3963
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3963
Number of HSP's successfully gapped: 1
Length of query: 1585
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1568
Effective length of database: 8,119,229
Effective search space: 12730951072
Effective search space used: 12730951072
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)