BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00858 (UTR included)
(2350 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2238_C1 773 0.0
>BF14_2238_C1
Length = 790
Score = 773 bits (390), Expect = 0.0
Identities = 407/412 (98%), Gaps = 3/412 (0%)
Strand = Plus / Plus
Query: 177 atgatatattatttgacctaattctgttgttgtgataattttaagaactaagtgtacaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgatatattatttgacctaattctgttgttgtgataattttaagaactaagtgtacaaa 60
Query: 237 gtgaagcaatacaaatctttatatgaatcttgttgaatttgt---ttttgtgtgaccttg 293
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 gtgaagcaatacaaatctttatatgaatcttgttgaatttgttgtttttgtgtgaccttg 120
Query: 294 tttatattttttatattcgactatttttatacctgtactttgttctaaaggggaaagaca 353
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 121 tttatattttttatattcgactatttttatacctgtactttgtcctaaagaggaaagaca 180
Query: 354 aattaaacaaaattttcaagatctcgatttaaactgtagtctgttgttatcgctgcgata 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattaaacaaaattttcaagatctcgatttaaactgtagtctgttgttatcgctgcgata 240
Query: 414 tttatttatgataaatatttaaagataatttttatacgtgttatcatgagtttatttttt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttatttatgataaatatttaaagataatttttatacgtgttatcatgagtttatttttt 300
Query: 474 taatactgttatattgtaaatataaatatgtctttcgtgaaatgctgttttgaggcagga 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taatactgttatattgtaaatataaatatgtctttcgtgaaatgctgttttgaggcagga 360
Query: 534 gaagggcatgatttcttggattcttttattcaaaagtgcacagatcctggat 585
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagggcatgatttcttggattcttttattcaaaagtgcacagatcctggat 412
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 314,869
Number of extensions: 6634
Number of successful extensions: 6634
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6633
Number of HSP's successfully gapped: 1
Length of query: 2350
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2333
Effective length of database: 8,119,229
Effective search space: 18942161257
Effective search space used: 18942161257
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)