BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07381 (UTR included)
(1459 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A1H06 615 e-176
>BF01027A1H06
Length = 759
Score = 615 bits (310), Expect = e-176
Identities = 316/319 (99%)
Strand = Plus / Plus
Query: 642 ccctgctgctgtttcttcatagactacatacaggtgctgtccgacaaggtggagtccagg 701
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ccctgctgctgtttcttcatagactacatacaggtgctgtccgacaagnnngagtccagg 60
Query: 702 ccgtattggcagaagggagcgctgtatattggtctcgctctgcctcctttcttcctgtgt 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgtattggcagaagggagcgctgtatattggtctcgctctgcctcctttcttcctgtgt 120
Query: 762 ctgctgagcgtgagcacgttcctcggcagcggactgatcttcgccaccggcgtcgtgtac 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgctgagcgtgagcacgttcctcggcagcggactgatcttcgccaccggcgtcgtgtac 180
Query: 822 ggcatgatgggagtcggaaagaagggttcccgggacgacatggcggcgatggctgcgggc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcatgatgggagtcggaaagaagggttcccgggacgacatggcggcgatggctgcgggc 240
Query: 882 gggtcgacgccacccggcccgccccaggacagcaccgtcacgctcatggaggaccccgac 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggtcgacgccacccggcccgccccaggacagcaccgtcacgctcatggaggaccccgac 300
Query: 942 gtctggcgccccaactaag 960
|||||||||||||||||||
Sbjct: 301 gtctggcgccccaactaag 319
Score = 244 bits (123), Expect = 3e-64
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 1337 ggcgtccgtggaggagatgcggaccgctgcgaccttggaggcgggagccagcgccgtccc 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggcgtccgtggaggagatgcggaccgctgcgaccttggaggcgggagccagcgccgtccc 378
Query: 1397 tcgagcgaaactcgtcgccaacgagcagccgttcagcttcaccagtccccccgccaagtg 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcgagcgaaactcgtcgccaacgagcagccgttcagcttcaccagtccccccgccaagtg 438
Query: 1457 atg 1459
|||
Sbjct: 439 atg 441
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 178,071
Number of extensions: 3850
Number of successful extensions: 3850
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3850
Number of HSP's successfully gapped: 2
Length of query: 1459
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1442
Effective length of database: 8,119,229
Effective search space: 11707928218
Effective search space used: 11707928218
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)