BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03371 (UTR included)
(1768 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_50_C1 1703 0.0
>BF14_50_C1
Length = 1600
Score = 1703 bits (859), Expect = 0.0
Identities = 868/871 (99%)
Strand = Plus / Plus
Query: 898 agcagaagtacctgtcggcgccggagagggaacacctagcgtcgctcatacacctcacgc 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcagaagtacctgtcggcgccggagagggaacacctagcgtcgctcatacacctcacgc 60
Query: 958 cgacccaggtcaaaatttggttccaaaatcaccgctacaaatgcaaacgacaggcgaagg 1017
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 cgacacaggtcaaaatttggttccaaaatcatcgctacaaatgcaaacgacaggcgaagg 120
Query: 1018 agaaggcgatggcggaacagaatcaacacaatcagtcggcgtcttctccgcgtcgtgtgg 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaaggcgatggcggaacagaatcaacacaatcagtcggcgtcttctccgcgtcgtgtgg 180
Query: 1078 cggtgccagtgctggtgaaggacggcaagccgtgcgggtcgggcgagtcctcgtccccgg 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggtgccagtgctggtgaaggacggcaagccgtgcgggtcgggcgagtcctcgtccccgg 240
Query: 1138 cacactgcgccacccccaccagctacccggcgccccagcaggccgcctgcagcaacctgt 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacactgcgccacccccaccagctacccggcgccccagcaggccgcctgcagcaacctgt 300
Query: 1198 cgtaccgccagcccgccgcctaccagcagcagtgctccggctacctgccgctgcaaggac 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgtaccgccagcccgccgcctaccagcagcagtgctccggctacctgccgctgcaaggac 360
Query: 1258 gagcctggtagaaattcccacagctttaccacgagacaatgttcaaagaggagatgtact 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcctggtagaaattcccacagctttaccacgagacaatgttcaaagaggagatgtact 420
Query: 1318 tcgattgattccacgctgacggatgaagtcgagtctctgtttcatgtcaaagattcgttt 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgattgattccacgctgacggatgaagtcgagtctctgtttcatgtcaaagattcgttt 480
Query: 1378 ggcgtcttcgatgggaacattgtcactggtaaagcggtggaagagtctaccgtgagtgac 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcgtcttcgatgggaacattgtcactggtaaagcggtggaagagtctaccgtgagtgac 540
Query: 1438 gtttagtgagtgatagtgaccttggtgacggtgacgggagtgtcggaccctacagcggca 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtttagtgagtgatagtgaccttggtgacggtgacgggagtgtcggaccctacagcggca 600
Query: 1498 gtcggtgtaaatattcagttagagtaaagcaccactaaggatttgactttaatctaatat 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 601 gtcggtgtaaatattcagttagagtaaagcaccactaaggatttgactttaatcttatat 660
Query: 1558 ttcttgtaaattgttttagtcgaatgcattccgttttgatttcgtgaaactgatttcccg 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcttgtaaattgttttagtcgaatgcattccgttttgatttcgtgaaactgatttcccg 720
Query: 1618 taccttaaaatactccacacgtaaagtatacagtgtagtgccggtagcagacaccagaga 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taccttaaaatactccacacgtaaagtatacagtgtagtgccggtagcagacaccagaga 780
Query: 1678 ttccgttctgatgaccctcagcttgtaaccctagagctactgtaaataactgatgaagta 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttccgttctgatgaccctcagcttgtaaccctagagctactgtaaataactgatgaagta 840
Query: 1738 ggtaattgttgtgtgaatagtataatttata 1768
|||||||||||||||||||||||||||||||
Sbjct: 841 ggtaattgttgtgtgaatagtataatttata 871
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 180,835
Number of extensions: 4017
Number of successful extensions: 4017
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4017
Number of HSP's successfully gapped: 1
Length of query: 1768
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1751
Effective length of database: 8,119,229
Effective search space: 14216769979
Effective search space used: 14216769979
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)