BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12798 (UTR included)
(3763 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2249_C1 206 2e-52
BF01055A1H12 125 5e-28
BF01062A1H02 98 1e-19
>BF14_2249_C1
Length = 1315
Score = 206 bits (104), Expect = 2e-52
Identities = 128/136 (94%)
Strand = Plus / Minus
Query: 3628 agtgccatctatcaatgtaaaaacgaaacattttcgatcggccgctgctaactgctagcg 3687
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1315 agtgccatctatcaatgtaaaaacgaaacatttccgatcggccgctgctaactgctagcg 1256
Query: 3688 cggctatgctgccacagcggctttaggcacaaccactcggtgcttattttccatacaaaa 3747
||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1255 ttgctatgcagccggagcggcgctaggcacaaccactcggtgcttattttccatacaaaa 1196
Query: 3748 atactcaaggacgatc 3763
||||||||||||||||
Sbjct: 1195 atactcaaggacgatc 1180
>BF01055A1H12
Length = 743
Score = 125 bits (63), Expect = 5e-28
Identities = 130/153 (84%), Gaps = 12/153 (7%)
Strand = Plus / Minus
Query: 3477 cagtggcgtgcactccatagatgaaaataagcactgcataccctacccatataacaacta 3536
||||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||
Sbjct: 620 cagtggcgtgcactccacagatgcaaataagcactgcctactctacccatataacaacta 561
Query: 3537 aacctatattgtttaatactta----------ttta--gatacattacgaaatacaaatg 3584
||||| |||| |||||| |||| |||| |||||||||||||||||||||
Sbjct: 560 aacctgtattatttaattcttactcacatacttttaatcatacattacgaaatacaaatg 501
Query: 3585 tttacagacatttaaaatgacatttgattcacg 3617
||||||||| ||||| ||| |||||||||||||
Sbjct: 500 tttacagacgtttaacatgtcatttgattcacg 468
>BF01062A1H02
Length = 876
Score = 97.6 bits (49), Expect = 1e-19
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 3483 cgtgcactccatagatgaaaataagcactgcataccctacccatataacaactaaac 3539
||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 854 cgtgcactccatagatgcaaataagcactgcataccctacccgtataacaactaaac 798
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 392,105
Number of extensions: 8074
Number of successful extensions: 8074
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8074
Number of HSP's successfully gapped: 4
Length of query: 3763
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3745
Effective length of database: 8,109,745
Effective search space: 30370995025
Effective search space used: 30370995025
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)