BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16435 (UTR included)
(4591 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A1D06 938 0.0
>BF01029A1D06
Length = 708
Score = 938 bits (473), Expect = 0.0
Identities = 473/473 (100%)
Strand = Plus / Plus
Query: 4119 tgacgacggccccggacagacggcgactcgcatcgttaaacaagactgatactttatatg 4178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacgacggccccggacagacggcgactcgcatcgttaaacaagactgatactttatatg 60
Query: 4179 acatcgcacgcgagccacgcgcctcgcgtgcctgtacatacataggaaatgtataaagcc 4238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acatcgcacgcgagccacgcgcctcgcgtgcctgtacatacataggaaatgtataaagcc 120
Query: 4239 tagggtcgggccacgagtccgagtagttaagttagcgtaagttacgaccagcgtctatcg 4298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagggtcgggccacgagtccgagtagttaagttagcgtaagttacgaccagcgtctatcg 180
Query: 4299 atcactgccaagttgtatatagtatagcgtcggttttatttgtcggcttgtatttttaag 4358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcactgccaagttgtatatagtatagcgtcggttttatttgtcggcttgtatttttaag 240
Query: 4359 ttggagctagcttaggtcgagttttgatgtcgagtaccaccaagtgcctcctacagcacg 4418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggagctagcttaggtcgagttttgatgtcgagtaccaccaagtgcctcctacagcacg 300
Query: 4419 gttctgccatggcagtgttcattttgtacgaggtttatacaagtagtcatatcgaagcgt 4478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttctgccatggcagtgttcattttgtacgaggtttatacaagtagtcatatcgaagcgt 360
Query: 4479 ttacattaagatatcttttatagatcgttttggacgttcctttctattatagtttcctcc 4538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttacattaagatatcttttatagatcgttttggacgttcctttctattatagtttcctcc 420
Query: 4539 tgtgtgatccagtgcgatgctgccattagttaagtctcgtgtgccgtgtgccc 4591
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtgtgatccagtgcgatgctgccattagttaagtctcgtgtgccgtgtgccc 473
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 431,411
Number of extensions: 7631
Number of successful extensions: 7631
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7631
Number of HSP's successfully gapped: 1
Length of query: 4591
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4573
Effective length of database: 8,109,745
Effective search space: 37085863885
Effective search space used: 37085863885
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)