BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20410 (UTR included)
(1810 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_900_C1 498 e-140
BF01050A1A06 76 2e-13
>BF14_900_C1
Length = 1281
Score = 498 bits (251), Expect = e-140
Identities = 251/251 (100%)
Strand = Plus / Minus
Query: 1560 acttcaaacaaggttgcgttaaacgtttaacgctgagggagagagagaaaaatccacaaa 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 acttcaaacaaggttgcgttaaacgtttaacgctgagggagagagagaaaaatccacaaa 1222
Query: 1620 tgtagaaagttgaagagagtgacagagaaagaaggatactcaaatgtagagtaggagaga 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 tgtagaaagttgaagagagtgacagagaaagaaggatactcaaatgtagagtaggagaga 1162
Query: 1680 gagagcaaaatccacaaatgtagaaagtggaagagagtgacagagaaagaaagatactca 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 gagagcaaaatccacaaatgtagaaagtggaagagagtgacagagaaagaaagatactca 1102
Query: 1740 atgtagagtaagagagagagtgagtgagtaagtagattccaagtatacagggaagtaaac 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 atgtagagtaagagagagagtgagtgagtaagtagattccaagtatacagggaagtaaac 1042
Query: 1800 agtgtgagcgc 1810
|||||||||||
Sbjct: 1041 agtgtgagcgc 1031
>BF01050A1A06
Length = 653
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1566 aacaaggttgcgttaaacgtttaacgctgagggagagagagaaaaatccacaaatgtaga 1625
|||||||||||||| |||||||||||| |||| |||||||||| || ||||||||||||
Sbjct: 491 aacaaggttgcgttgaacgtttaacgcggagg--gagagagaaagatacacaaatgtaga 548
Query: 1626 aagttgaagagag 1638
|||| | ||||||
Sbjct: 549 aagtaggagagag 561
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,353
Number of extensions: 5941
Number of successful extensions: 5941
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5936
Number of HSP's successfully gapped: 2
Length of query: 1810
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1793
Effective length of database: 8,119,229
Effective search space: 14557777597
Effective search space used: 14557777597
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)