BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10857 (UTR included)
(3004 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2G11 989 0.0
BF01060A2F08 928 0.0
>BF01056B2G11
Length = 586
Score = 989 bits (499), Expect = 0.0
Identities = 517/522 (99%), Gaps = 2/522 (0%)
Strand = Plus / Plus
Query: 1518 agcaaggagtccttcaggaagacctggaacgctaaatacagtctgcgttcacactttgat 1577
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 agcaacgagtccttcaggaagacctggaacgctaaatacagtctgcgttcacactttgat 126
Query: 1578 ggggtgcgtgctctcgccttccatccgacgcgggctgctttggtgacagcctccgaggat 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ggggtgcgtgctctcgccttccatccgacgcgggctgctttggtgacagcctccgaggat 186
Query: 1638 cacacgctgaagatgtgggatctccagcgtactgtcccagctaagaagtcggccggtttg 1697
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 187 cacacgctgaagatgtgggatctccagcgtactgtcccagctaagaagtcggccggcttg 246
Query: 1698 gatgtggaacctctgtatacgttcagagcccacacagcgccggtgctctgcctcgctatg 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gatgtggaacctctgtatacgttcagagcccacacagcgccggtgctctgcctcgctatg 306
Query: 1758 ggcgctccccgctcggaggaatgtttctcagggggtctggacgggaccatcagagtttgg 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggcgctccccgctcggaggaatgtttctcagggggtctggacgggaccatcagagtttgg 366
Query: 1818 aacctgcccccacccatcgctgatccatacgactcatatgatcccgctgtattggggcct 1877
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aacctgcccccacccatcgctgatccatacgactcatatgatcccgctgtattggggccg 426
Query: 1878 gtactccgcgagcacacggacgcggtgtggtcgctgtcgtgcgctggtggtaggctgttg 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gtactccgcgagcacacggacgcggtgtggtcgctgtcgtgcgctggtggtaggctgt-- 484
Query: 1938 tcttcatcagcggacggtacagccaggctgtggtccccacgagaccctcggcccctgctc 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcttcatcagcggacggtacagccaggctgtggtccccacgagaccctcggcccctgctc 544
Query: 1998 gccacgctcagggacgactcccccggctccacctcagcgccg 2039
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gccacgctcagggacgactcccccggctccacctcagcgccg 586
Score = 155 bits (78), Expect = 5e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1416 gcgacagcggcgcgtgagggtgacgggaagccgctagctctgggagagctggcacagctg 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgacagcggcgcgtgagggtgacgggaagccgctagctctgggagagctggcacagctg 60
Query: 1476 acggtcagcaacgagtcc 1493
||||||||||||||||||
Sbjct: 61 acggtcagcaacgagtcc 78
>BF01060A2F08
Length = 728
Score = 928 bits (468), Expect = 0.0
Identities = 474/477 (99%)
Strand = Plus / Minus
Query: 2528 attttagtttacgaactgtatgttaacgcagtagcgagtcccgtcgctcgcccccgatgg 2587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 attttagtttacgaactgtatgttaacgcagtagcgagtcccgtcgctcgcccccgatgg 669
Query: 2588 cgtctagtcccggtgttttgacgtatttaatattgtaacgttacggacggtcgacgctcg 2647
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cgnnnagtcccggtgttttgacgtatttaatattgtaacgttacggacggtcgacgctcg 609
Query: 2648 ttgtaagcgcgtagtgaacactcatctctgtatagacatttaaaatctattataatatat 2707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttgtaagcgcgtagtgaacactcatctctgtatagacatttaaaatctattataatatat 549
Query: 2708 ttttagattttcagtatgtggattttaggtttttattgcaacttttttcaccgattttac 2767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttttagattttcagtatgtggattttaggtttttattgcaacttttttcaccgattttac 489
Query: 2768 gatacgcagtgagaatattgatcgtttctatgcatctgtaagcgagccctttgtaataaa 2827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gatacgcagtgagaatattgatcgtttctatgcatctgtaagcgagccctttgtaataaa 429
Query: 2828 tatcatgaggatatagaagatgtttctttgatgcgttcatattacgtgtctgtacagttc 2887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tatcatgaggatatagaagatgtttctttgatgcgttcatattacgtgtctgtacagttc 369
Query: 2888 tagatattatgcagtatttcataataatttgcagagaacgtgtgaggtatggtttgttta 2947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tagatattatgcagtatttcataataatttgcagagaacgtgtgaggtatggtttgttta 309
Query: 2948 gctagtatgttttatttaaaactatcggatctatatagacggtactcttgttttgtc 3004
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gctagtatgttttatttaaaactatcggatctatatagacggtactcttgttttgtc 252
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,788
Number of extensions: 5510
Number of successful extensions: 5510
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5509
Number of HSP's successfully gapped: 3
Length of query: 3004
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2986
Effective length of database: 8,109,745
Effective search space: 24215698570
Effective search space used: 24215698570
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)