BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07526 (UTR included)
(16,060 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A2B12 428 e-118
BF14_736_C1 96 2e-18
BF14_673_C1 90 1e-16
BF01054B2B08 72 3e-11
BF01011A1B08 72 3e-11
>BF01033A2B12
Length = 863
Score = 428 bits (216), Expect = e-118
Identities = 222/224 (99%)
Strand = Plus / Plus
Query: 15307 aaggattcgttcattacgttctgaacatcgactggcgctatcaagtgtggaaggctggtg 15366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggattcgttcattacgttctgaacatcgactggcgctatcaagtgtggaaggctggtg 60
Query: 15367 tcaccataactgataactcctttctgtactctctttggtatttctctttctccgtgatgg 15426
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 tcaccataactgataactcctttctgtactctctgtggtatttctctttctccgtgatgg 120
Query: 15427 gtaacttcaacaatttcttctttgccgctcatctgctggatgttgctgttggttttaaaa 15486
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 gtaacttcaacaatttcttctttgccgctcatctgctggacgttgctgttggttttaaaa 180
Query: 15487 ctctgaggactattctgcaatctgtcactcataacggaaaacaa 15530
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctctgaggactattctgcaatctgtcactcataacggaaaacaa 224
>BF14_736_C1
Length = 796
Score = 95.6 bits (48), Expect = 2e-18
Identities = 115/136 (84%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 3538 agctcgaacatgggctggctgaaccggggaagtaccaccgtctcaaagaaaatctgcgtg 3597
|||||||||||||||||||| ||||||||||||||||| ||||| |||| ||| |||||
Sbjct: 616 agctcgaacatgggctggctcgaccggggaagtaccaccctctcacagaagatcggcgtg 675
Query: 3598 aagtag-ctttaatggcgccgtttcgaccgatgagtgaaagcgccgtttgtcgtttccct 3656
|||||| ||||| |||| ||||||| || |||||||| || |||| ||| | |||||
Sbjct: 676 aagtagtctttagtggctgcgtttcgtccaatgagtgagagagccggttgccctttccgc 735
Query: 3657 tttcccaccctttcct 3672
||| |||||||||||
Sbjct: 736 gttctcaccctttcct 751
>BF14_673_C1
Length = 1197
Score = 89.7 bits (45), Expect = 1e-16
Identities = 91/105 (86%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 3650 tttcccttttcccaccctttcctccccttctaccacaatcaaggtcggcaacgcatctgc 3709
||||||||||||| || ||||||| | ||| |||||| |||||||||||||||||| ||
Sbjct: 1065 tttcccttttcccgccttttcctcttcctctcccacaaccaaggtcggcaacgcatccgc 1006
Query: 3710 aaca-cccctatgttgcaaatgtccatgggcgacggttactacct 3753
|||| ||| ||||||||| |||||||| |||||||| |||||||
Sbjct: 1005 aacatcccttatgttgcagatgtccataagcgacggtgactacct 961
>BF01054B2B08
Length = 807
Score = 71.9 bits (36), Expect = 3e-11
Identities = 112/136 (82%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 3538 agctcgaacatgggctggctgaaccggggaagtaccaccgtctcaaagaaaatctgcgtg 3597
|||||||||| ||| ||||| |||||||| |||| | | ||||| |||| ||| ||||
Sbjct: 610 agctcgaacaagggttggctcgaccggggatgtactagcctctcacagaagatcggcgta 669
Query: 3598 aagtag-ctttaatggcgccgtttcgaccgatgagtgaaagcgccgtttgtcgtttccct 3656
||| || |||||||||| ||||||| |||||||||| || |||| ||| | |||||||
Sbjct: 670 aagcagtctttaatggctgcgtttcgttcgatgagtgagagagccggttgccctttccct 729
Query: 3657 tttcccaccctttcct 3672
|||||||||||||||
Sbjct: 730 gttcccaccctttcct 745
>BF01011A1B08
Length = 853
Score = 71.9 bits (36), Expect = 3e-11
Identities = 109/132 (82%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 3538 agctcgaacatgggctggctgaaccggggaagtaccaccgtctcaaagaaaatctgcgtg 3597
||||| |||||||||||||| || ||| |||||||| | ||||| |||| ||| |||||
Sbjct: 146 agctcaaacatgggctggctcgacggggcaagtaccatcctctcacagaagatcggcgtg 87
Query: 3598 aagtag-ctttaatggcgccgtttcgaccgatgagtgaaagcgccgtttgtcgtttccct 3656
|||||| | |||||| | ||||||| | ||||| ||| | |||||||| | |||||||
Sbjct: 86 aagtagtcattaatgactgcgtttcgtctgatgaatgagaaagccgtttgccctttccct 27
Query: 3657 tttcccaccctt 3668
||||||||||||
Sbjct: 26 tttcccaccctt 15
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,540
Number of extensions: 38933
Number of successful extensions: 38933
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 38931
Number of HSP's successfully gapped: 5
Length of query: 16060
Length of database: 8,280,457
Length adjustment: 19
Effective length of query: 16041
Effective length of database: 8,100,261
Effective search space: 129936286701
Effective search space used: 129936286701
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 36 (71.9 bits)