BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03204 (UTR included)
(2593 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A1H11 1318 0.0
BF01049B2F08 357 6e-98
BF14_1793_C1 145 4e-34
>BF01024A1H11
Length = 787
Score = 1318 bits (665), Expect = 0.0
Identities = 674/677 (99%)
Strand = Plus / Plus
Query: 1917 caggtggagcagggcggcgagacgctggaggcgctctcgatgggtggaggggtagcccag 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 caggtggagcagggcggcgagacgctggaggcgctctcgatgggtggaggggtagcccag 75
Query: 1977 gtggtactacaggggggggaacaggtgttgcaggtgttgagcctcaaggacgcctccgta 2036
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gtggtactacaggggggagaacaggtgttgcaggtgttgagcctcaaggacgcctccgta 135
Query: 2037 ctcaccaaggccatgcaagtgaagtccgaacgtgacgcggtggtggcggactcctagctg 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ctcaccaaggccatgcaagtgaagtccgaacgtgacgcggtggtggcggactcctagctg 195
Query: 2097 ctaacgctggtggcccacgaccaccaacagcaacaacaactgatggagcaagacgaacag 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ctaacgctggtggcccacgaccaccaacagcaacaacaactgatggagcaagacgaacag 255
Query: 2157 gagatggagcaacaagacgaggagacgtagctcacgacggaacggacgggcagtgttgtg 2216
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 256 gagatggagcaacaagacgaggagacgtagctcacgacggaacggacggccagtgttgtg 315
Query: 2217 taggactattgatgtagttcaagtggactacactatgacgaatatatgaactaaactaaa 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 taggactattgatgtagttcaagtggactacactatgacgaatatatgaactaaactaaa 375
Query: 2277 ctaacactttatgaagtatagaaaatcaatgtcgaatgttctatacacacatactgaaaa 2336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctaacactttatgaagtatagaaaatcaatgtcgaatgttctatacacacatactgaaaa 435
Query: 2337 gtattttaatctttgacacgatacctacattaaggcatcgttaaaggcacattttcattg 2396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtattttaatctttgacacgatacctacattaaggcatcgttaaaggcacattttcattg 495
Query: 2397 gtcgataagtcggtagttagcccgattgcgggaagtacccgcatgcgagctaacaaccaa 2456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtcgataagtcggtagttagcccgattgcgggaagtacccgcatgcgagctaacaaccaa 555
Query: 2457 tgaaatccactggtcgataacttggtcgattaaacgtgtgcgggtgatatccgcattccg 2516
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 556 tgaaatccactggtcgataacttggtcgattaaacttgtgcgggtgatatccgcattccg 615
Query: 2517 gaataacggaattcgcatgcgttatagaaattacccgcaccccgtatgcgggctctgacg 2576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gaataacggaattcgcatgcgttatagaaattacccgcaccccgtatgcgggctctgacg 675
Query: 2577 accagtgaaaacgataa 2593
|||||||||||||||||
Sbjct: 676 accagtgaaaacgataa 692
>BF01049B2F08
Length = 791
Score = 357 bits (180), Expect = 6e-98
Identities = 201/208 (96%)
Strand = Plus / Minus
Query: 2386 cattttcattggtcgataagtcggtagttagcccgattgcgggaagtacccgcatgcgag 2445
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 759 cattttcattggtcgataagtcggtagttagcccgattgcggggagtacccgcatgcgag 700
Query: 2446 ctaacaaccaatgaaatccactggtcgataacttggtcgattaaacgtgtgcgggtgata 2505
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 699 ctaacaaccaatgaaatccactggtcgataactctgtcgattaaacgtgtgcgggtgata 640
Query: 2506 tccgcattccggaataacggaattcgcatgcgttatagaaattacccgcaccccgtatgc 2565
||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 639 tccgcattccggaataacggaattcgcatgcgttagagaaatcgcccgcaccccgtatgc 580
Query: 2566 gggctctgacgaccagtgaaaacgataa 2593
||||||||||||||||| ||||||||||
Sbjct: 579 gggctctgacgaccagttaaaacgataa 552
>BF14_1793_C1
Length = 1130
Score = 145 bits (73), Expect = 4e-34
Identities = 79/81 (97%)
Strand = Plus / Minus
Query: 2434 cccgcatgcgagctaacaaccaatgaaatccactggtcgataacttggtcgattaaacgt 2493
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 931 cccgcatgcgagctaacaaccaatgaaatccactggtcgataactcggttgattaaacgt 872
Query: 2494 gtgcgggtgatatccgcattc 2514
|||||||||||||||||||||
Sbjct: 871 gtgcgggtgatatccgcattc 851
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 213,947
Number of extensions: 4386
Number of successful extensions: 4386
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4386
Number of HSP's successfully gapped: 4
Length of query: 2593
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2576
Effective length of database: 8,119,229
Effective search space: 20915133904
Effective search space used: 20915133904
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)