BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08387 (UTR included)
(3739 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B2B11 1419 0.0
BF01015B2H03 1259 0.0
>BF01042B2B11
Length = 787
Score = 1419 bits (716), Expect = 0.0
Identities = 740/748 (98%)
Strand = Plus / Plus
Query: 1509 accagaatacaaaatattgaggaatataatgaagaagtatcagaagagatagacacagac 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 accagaatacaaaatattgaggaatataatgaagaagtatcagaagagatagacacagac 99
Query: 1569 gattattggcagttcctttggaaaaaacatttcggggagcagtatgcattgcattacgct 1628
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 100 gattattggcagttcctttggaagaaacatttcggggagcagtatgccttgcattacgct 159
Query: 1629 aaatatatagaatgctacagtgaactccaagcaatacagatcaatacgaacgacattgaa 1688
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 160 aaatatatagaatgctacagtgaactccaagcaatacagatcaatgcgaacgacattgaa 219
Query: 1689 aacaaaatcgaagaaaccaaagtgattgatggtgaatgcgaaaatagtgagggcaattca 1748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aacaaaatcgaagaaaccaaagtgattgatggtgaatgcgaaaatagtgagggcaattca 279
Query: 1749 ctagaaatgccgtcggtgatcgaagttcagacacaaatcaatcaaatcaaattagaggaa 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ctagaaatgccgtcggtgatcgaagttcagacacaaatcaatcaaatcaaattagaggaa 339
Query: 1809 aaagtttcgaaaccgaaaaagagagggaaaaaagctagcaatcgcgtcataagctcggtc 1868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaagtttcgaaaccgaaaaagagagggaaaaaagctagcaatcgcgtcataagctcggtc 399
Query: 1869 ggagttttgttgcagaatcttctaagagatcagaaagaaaaagaggctaatgaaccgata 1928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggagttttgttgcagaatcttctaagagatcagaaagaaaaagaggctaatgaaccgata 459
Query: 1929 gatgcgggtgatgataaaacaaaaaccggtgataagggtgatactgtggaactaaaggtc 1988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gatgcgggtgatgataaaacaaaaaccggtgataagggtgatactgtggaactaaaggtc 519
Query: 1989 gaaagcagaactagtattaataattctcaaaccaacgccagcgttgtccaacataatgac 2048
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 520 gaaagcagaactagtattaataattctcaaaccaacgccagcgttgttcaacataatgac 579
Query: 2049 gagggagacggcaacgatccccatgaagatagaccaactactttgaaacgaagtcatcaa 2108
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gagggagacggcaacgatccctatgaagatagaccaactactttgaaacgaagtcatcaa 639
Query: 2109 ttggacgaagacgacagttcggagaagataaaatcgacaatagagatgatgggtttttca 2168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttggacgaagacgacagttcggagaagataaaatcgacaatagagatgatgggtttttca 699
Query: 2169 gtggacccagagaaaataccgaaaggtgaattgatttataggaataaatttggtaaactc 2228
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 700 gtagacccagagaaaataccgaaaggtgaattgatttataggaataaattcggtaaactt 759
Query: 2229 cgtccgccgcgatacaagaaattcgcta 2256
||||||||||||||||||||||||||||
Sbjct: 760 cgtccgccgcgatacaagaaattcgcta 787
>BF01015B2H03
Length = 647
Score = 1259 bits (635), Expect = 0.0
Identities = 644/647 (99%)
Strand = Plus / Plus
Query: 2860 tagatccaataaagatagaaatggcaaagcacaacgcggcagtctacggcgtctccgaca 2919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagatccaataaagatagaaatggcaaagcacaacgcggcagtctacggcgtctccgaca 60
Query: 2920 ggatacagttcattgttggtgatttcttcgaattagcgcacacgctgacagctgatatgg 2979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatacagttcattgttggtgatttcttcgaattagcgcacacgctgacagctgatatgg 120
Query: 2980 tgtttttgagtccaccctggggtgggcctagctattctcagaacacagaatactgtatag 3039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtttttgagtccaccctggggtgggcctagctattctcagaacacagaatactgtatag 180
Query: 3040 aaacaatgctggaacccaaaccggcctcagagctgatgagagtggcgcgtcacattaaca 3099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacaatgctggaacccaaaccggcctcagagctgatgagagtggcgcgtcacattaaca 240
Query: 3100 ctaacgtcacattgtatctgccaagaaatacaaggacggaacagatattgtcattggcac 3159
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctaacgtcacattgtatctaccaagaaatacaaggacggaacagatattgtcattggcac 300
Query: 3160 aagaggcgggtgggtctgtggaaatagaacagagttttcttgatagaagatttattgcta 3219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaggcgggtgggtctgtggaaatagaacagagttttcttgatagaagatttattgcta 360
Query: 3220 ttacagcatacttttattgattgatattaataataagaattatagctactcctctaaaaa 3279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttacagcatacttttattgattgatattaataataagaattatagctactcctctaaaaa 420
Query: 3280 ttaaataaacgggacatactctttctgaccacttgatattaatttaaaagaaatatcaga 3339
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttaaataaacgggacatattctttctgaccacttgatattaatttaaaagaaatatcaga 480
Query: 3340 gaattatttacataatctgaaactgccttatagtacttgtgagttttattgttcacatag 3399
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaattatttacaaaatctgaaactgccttatagtacttgtgagttttattgttcacatag 540
Query: 3400 aagtttgtcttgtagaataacatattcaaatattttattaataaatacataaaaaaatat 3459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagtttgtcttgtagaataacatattcaaatattttattaataaatacataaaaaaatat 600
Query: 3460 aaatatatatgattggaaaactagagagaaaataatattgatgttag 3506
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatatatatgattggaaaactagagagaaaataatattgatgttag 647
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 495,479
Number of extensions: 10851
Number of successful extensions: 10851
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10851
Number of HSP's successfully gapped: 2
Length of query: 3739
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3721
Effective length of database: 8,109,745
Effective search space: 30176361145
Effective search space used: 30176361145
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)