BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22333 (UTR included)
(6100 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B2A06 291 7e-78
>BF01051B2A06
Length = 756
Score = 291 bits (147), Expect = 7e-78
Identities = 288/335 (85%)
Strand = Plus / Plus
Query: 5004 ggtatatacgagtgtaattcgaggtgtaaatgtagagacacgtgccttaaccgcgtcgct 5063
||||| |||||||| || || ||||| || |||| |||||| || |||||||||||||||
Sbjct: 22 ggtatttacgagtgcaactctaggtgcaagtgtaaagacacttgtcttaaccgcgtcgct 81
Query: 5064 caacatccgctgcagctgaagttacaagtgttcaagaccctcaaccgcgggtgggggatt 5123
||| |||| || ||||| || || || ||||||||||||| |||||||| ||||| |||
Sbjct: 82 caatatccacttcagctaaatttgcaggtgttcaagacccagaaccgcggttggggcatt 141
Query: 5124 cgcgccctcaacgacataccgaaaggggccttcctttgcgtctacgctggaaatttgctc 5183
||| |||| || |||||||| || ||| |||||| || ||||| || || | ||
Sbjct: 142 cgcaccctgaatgacatacccaaggggagcttcctctgtacttacgcagggaaactacta 201
Query: 5184 accgacgctacagcaaaccttgacggtctgaacgagggtgacgagtacctggcggagttg 5243
|| || || ||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 202 acagaggccacagctaccctcgacggtctgaacgagggtgacgagtacctggcggagttg 261
Query: 5244 gactacatcgaggtcgtggaacagatgaaggagggttacgaagaggacataccagagaac 5303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gactacatcgaggtcgtggaacagatgaaggagggttacgaagaggacataccagagaac 321
Query: 5304 atcaagaagatggatgaggcggaaatagcgaaaca 5338
|||||||||||||||||||| |||||||| ||||
Sbjct: 322 atcaagaagatggatgaggctcaaatagcggaaca 356
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 94,081
Number of extensions: 11442
Number of successful extensions: 11442
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11442
Number of HSP's successfully gapped: 2
Length of query: 6100
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6082
Effective length of database: 8,109,745
Effective search space: 49323469090
Effective search space used: 49323469090
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)