BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19875 (UTR included)
(2098 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027B2H11 1237 0.0
>BF01027B2H11
Length = 714
Score = 1237 bits (624), Expect = 0.0
Identities = 624/624 (100%)
Strand = Plus / Plus
Query: 1475 tgacgacgcaccatccacagacttggaccagcaatgcgacgggcaggatctagaccacgt 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacgacgcaccatccacagacttggaccagcaatgcgacgggcaggatctagaccacgt 60
Query: 1535 ccccagtctagactcggcggagtctgaggaggatcacgacgaccaagacgatcatctatt 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccccagtctagactcggcggagtctgaggaggatcacgacgaccaagacgatcatctatt 120
Query: 1595 gtgacgccccataccccagcagcatttgctagttctctgaaatgaatgcgaagttgccgg 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgacgccccataccccagcagcatttgctagttctctgaaatgaatgcgaagttgccgg 180
Query: 1655 ggaattcggatgttactgattgctcgttttctagccaacgctttatttctagtcaaatcc 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaattcggatgttactgattgctcgttttctagccaacgctttatttctagtcaaatcc 240
Query: 1715 gaaaccgagtgacttcgtgtcgaagtgtacaggaagtgactgtagtgattctggtccacg 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaccgagtgacttcgtgtcgaagtgtacaggaagtgactgtagtgattctggtccacg 300
Query: 1775 aactgatgaaatgatctctcaatattaaatgttctagtcaaacttaacccgatagtccgc 1834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactgatgaaatgatctctcaatattaaatgttctagtcaaacttaacccgatagtccgc 360
Query: 1835 cgttcttcagtattaggtgagatgtgttttattttattgtttcatagtgtatgtgtcctg 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgttcttcagtattaggtgagatgtgttttattttattgtttcatagtgtatgtgtcctg 420
Query: 1895 tgaatacattcagcgtagaacggaatagattaatatgtatggagatttatttatttactg 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaatacattcagcgtagaacggaatagattaatatgtatggagatttatttatttactg 480
Query: 1955 ttaaatacgattaacgtatatgcgattgtaattctggaggtttattttcagcgacgttaa 2014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttaaatacgattaacgtatatgcgattgtaattctggaggtttattttcagcgacgttaa 540
Query: 2015 tgtattcaatcggtgcggcttttgtagttaaaatgaaatataaactattaaatgacgcga 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtattcaatcggtgcggcttttgtagttaaaatgaaatataaactattaaatgacgcga 600
Query: 2075 taattagttggaatgtccgattta 2098
||||||||||||||||||||||||
Sbjct: 601 taattagttggaatgtccgattta 624
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 162,680
Number of extensions: 3181
Number of successful extensions: 3181
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3181
Number of HSP's successfully gapped: 1
Length of query: 2098
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2081
Effective length of database: 8,119,229
Effective search space: 16896115549
Effective search space used: 16896115549
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)