BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11133 (UTR included)
(2245 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1F07 591 e-168
>BF01011B1F07
Length = 634
Score = 591 bits (298), Expect = e-168
Identities = 301/302 (99%)
Strand = Plus / Plus
Query: 787 gatcctcgagtgacgagtccggagctgtcaaagaatacgaaacaacaacaatatcaaaac 846
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 200 gatcctcgagtgacgagtccggagctgtcaaagaatacgaaacaacaactatatcaaaac 259
Query: 847 taacgaatgaagtgacgactataagtagagtcgtaggaaaagacgttctggacagagtca 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taacgaatgaagtgacgactataagtagagtcgtaggaaaagacgttctggacagagtca 319
Query: 907 cgaccaccgatgacgtcatagtgagacacgaggagaccgcgaggaaagacggcttcaacg 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cgaccaccgatgacgtcatagtgagacacgaggagaccgcgaggaaagacggcttcaacg 379
Query: 967 aaacatccgtctcttacacgaacaacgtgataaaaatacacagcaacgtggagataagaa 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaacatccgtctcttacacgaacaacgtgataaaaatacacagcaacgtggagataagaa 439
Query: 1027 aggacgggcacatagacaagacgcacgaagcgaaggacgggaagatggagaaaataccgc 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aggacgggcacatagacaagacgcacgaagcgaaggacgggaagatggagaaaataccgc 499
Query: 1087 cc 1088
||
Sbjct: 500 cc 501
Score = 167 bits (84), Expect = 1e-40
Identities = 90/92 (97%)
Strand = Plus / Plus
Query: 1356 ccgcccctcgcacacaaccatataccgaaaataccgatcgtacccatcactaacgtcaag 1415
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 496 ccgcccctcgcacacaaccacataccgaaaataccgatcgtacccatcaccaacgtcaag 555
Query: 1416 accaattacaagcgagtcaagagaaaagtcgg 1447
||||||||||||||||||||||||||||||||
Sbjct: 556 accaattacaagcgagtcaagagaaaagtcgg 587
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 739 gggactgcgccctctacaccaacaaccagcgaaacatcactatcagtcg 787
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggattgcgccctctacaccaacaaccagcgaaacatcactatcagtcg 49
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,565
Number of extensions: 4303
Number of successful extensions: 4303
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4303
Number of HSP's successfully gapped: 3
Length of query: 2245
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2228
Effective length of database: 8,119,229
Effective search space: 18089642212
Effective search space used: 18089642212
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)