BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12904 (UTR included)
(2056 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2570_C1 1651 0.0
BF01033A2H10 547 e-155
>BF14_2570_C1
Length = 1057
Score = 1651 bits (833), Expect = 0.0
Identities = 852/857 (99%), Gaps = 1/857 (0%)
Strand = Plus / Plus
Query: 1200 cggctggcgtggaacaagcaggaccccaactacttggccactatagcgatggacgcgtgt 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggctggcgtggaacaagcaggaccccaactacttggccactatagcgatggacgcgtgt 60
Query: 1260 gaagtcatcatacttgacgtgagggttccttgcacgccggtcgccaggctcaacaaccac 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtcatcatacttgacgtgagggttccttgcacgccggtcgccaggctcaacaaccac 120
Query: 1320 agagcctgtgttaacggcatcgcttgggctccgcacagttcgtgccacatctgcacggcg 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagcctgtgttaacggcatcgcttgggctccgcacagttcgtgccacatctgcacggcg 180
Query: 1380 ggcgacgaccaccaggcgctgatctgggacatccagcagatgccgcgcgccatcgaggac 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcgacgaccaccaggcgctgatctgggacatccagcagatgccgcgcgccatcgaggac 240
Query: 1440 cccatcctggcgtacaccgccgccgagggtgaggtcaaccagatccagtggggcgccacc 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccatcctggcgtacaccgccgccgagggtgaggtcaaccagatccagtggggcgccacc 300
Query: 1500 cagcccgactggatcgccatatgctataacagacacaccgaaatattacgcgtctgagat 1559
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 301 cagcccgactggatcgccatatgctataacagacacaccgaaa-attacgcgtctgagat 359
Query: 1560 tatccccctcggatgacccgcgtccgactttacccctctccgaagttgccttgtgattct 1619
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tatccccctcggatgacccgcgtccgactttacccctctccgaagttgccttgtgattca 419
Query: 1620 gacttaacgatcgtgatagctgttatcaggctagctgttggctcgttaatcatattataa 1679
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gacttaacgatcgcaatagctgttatcaggctagctgttggctcgttaatcatattataa 479
Query: 1680 cgatgtacctgtgatctacatcgctctcatttctcgccagcctaatcattcgttaacatt 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cgatgtacctgtgatctacatcgctctcatttctcgccagcctaatcattcgttaacatt 539
Query: 1740 tagcaggacacgcgccgcatatgatgcgggtctgtgtgtcctgtgacgtcactctcgtat 1799
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 540 tagcaggacacgcgccgcatatgatgcgggtctgtgtgtcctgtgacgtcactctcatat 599
Query: 1800 gtgcatgcattattctcatacactgtaactgtgattctcgcgtgtccagctgccgggagc 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtgcatgcattattctcatacactgtaactgtgattctcgcgtgtccagctgccgggagc 659
Query: 1860 gaggtgaaccagatccagtggggcgccacgcagcccgactggatcgcgatatgctataac 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gaggtgaaccagatccagtggggcgccacgcagcccgactggatcgcgatatgctataac 719
Query: 1920 agacacaccgagatactgcgagtttagatctgtagagagtaaacatactccaccactgac 1979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agacacaccgagatactgcgagtttagatctgtagagagtaaacatactccaccactgac 779
Query: 1980 accacccacctgaacctcggtacaccacaccacagactaaaagtgacccgtttggcttca 2039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 accacccacctgaacctcggtacaccacaccacagactaaaagtgacccgtttggcttca 839
Query: 2040 tcagatatattaattat 2056
|||||||||||||||||
Sbjct: 840 tcagatatattaattat 856
>BF01033A2H10
Length = 773
Score = 547 bits (276), Expect = e-155
Identities = 311/324 (95%), Gaps = 9/324 (2%)
Strand = Plus / Plus
Query: 1226 caactacttggccactatagcgatggacgcgtgtgaagtcatcatacttgacgtgagggt 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caactacttggccactatagcgatggacgcgtgtgaagtcatcatacttgacgtgagggt 60
Query: 1286 tccttgcacgccggtcgccaggctcaacaaccacagagcctgtgttaacggcatcgcttg 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccttgcacgccggtcgccaggctcaacaaccacagagcctgtgttaacggcatcgcttg 120
Query: 1346 ggctccgcacagttcgtgccacatctgcacggcgggcgacgaccaccaggcgctgatctg 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggctccgcacagttcgtgccacatctgcacggcgggcgacgaccaccaggcgctgatctg 180
Query: 1406 ggacatccagcagatgccgcgcgccatcgaggaccccatcctggcgtacaccgccgccga 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggacatccagcagatgccgcgcgccatcgaggaccccatcctggcgtacaccgccgccga 240
Query: 1466 gg---------gtgaggtcaaccagatccagtggggcgccacccagcccgactggatcgc 1516
|| | ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 ggctgccgggagcgaggtgaaccagatccagtggggcgccacgcagcccgactggatcgc 300
Query: 1517 catatgctataacagacacaccga 1540
|||||||||||||||||||||||
Sbjct: 301 gatatgctataacagacacaccga 324
Score = 406 bits (205), Expect = e-113
Identities = 208/209 (99%)
Strand = Plus / Plus
Query: 1848 gctgccgggagcgaggtgaaccagatccagtggggcgccacgcagcccgactggatcgcg 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gctgccgggagcgaggtgaaccagatccagtggggcgccacgcagcccgactggatcgcg 301
Query: 1908 atatgctataacagacacaccgagatactgcgagtttagatctgtagagagtaaacatac 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atatgctataacagacacaccgagatactgcgagtttagatctgtagagagtaaacatac 361
Query: 1968 tccaccactgacaccacccacctgaacctcggtacaccacaccacagactaaaagtgacc 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tccaccactgacaccacccacctgaacctcggtacaccacaccacagactaaaagtgacc 421
Query: 2028 cgtttggcttcatcagatatattaattat 2056
|| ||||||||||||||||||||||||||
Sbjct: 422 cgcttggcttcatcagatatattaattat 450
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,503
Number of extensions: 3553
Number of successful extensions: 3553
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3550
Number of HSP's successfully gapped: 4
Length of query: 2056
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2039
Effective length of database: 8,119,229
Effective search space: 16555107931
Effective search space used: 16555107931
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)