BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01943 (UTR included)
(1522 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1E11 192 1e-48
BF14_2430_C1 167 6e-41
BF14_1645_C1 133 9e-31
BF01051A1D12 100 1e-20
BF14_3240_C1 100 1e-20
BF14_1695_C1 86 2e-16
>BF01025B1E11
Length = 786
Score = 192 bits (97), Expect = 1e-48
Identities = 153/169 (90%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 171 tgtttaagatttactagcaaagttcctaattgtgacttcac-cgaggctattaaatttta 229
||||| |||| ||||| ||||||||||||||||||||||| || |||| | ||||||||
Sbjct: 111 tgttttagatctactaacaaagttcctaattgtgacttcagtcggggctgtaaaatttta 170
Query: 230 tttcattcaaaagttaatcccggatcgtgtctcctccattctacacgacactggtagaat 289
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 171 tttcattcaaaagttaatcccggatcgtgtttcctccattctacacgatactggcagaat 230
Query: 290 atactatgcacgtctttgcacggatgaagtccatattttaaacaaacaa 338
||| | |||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 231 atattgtgcacgtccttgcacggatgaaggccata-tttaaacaaacaa 278
>BF14_2430_C1
Length = 830
Score = 167 bits (84), Expect = 6e-41
Identities = 133/148 (89%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 188 caaagttcctaattgtgacttcac-cgaggctattaaattttatttcattcaaaagttaa 246
|||||||||||||||| |||||| ||||||| |||||| ||||| ||||| |||||||
Sbjct: 92 caaagttcctaattgttacttcagtcgaggctgttaaatcttattgtattcataagttaa 151
Query: 247 tcccggatcgtgtctcctccattctacacgacactggtagaatatactatgcacgtcttt 306
||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 152 tcccggatcgtgtttcctccattctacacgacactggcagaatatactgtgcacatcttt 211
Query: 307 gcacggatgaagtccatattttaaacaa 334
||||| |||||| |||||||| ||||||
Sbjct: 212 gcacgtatgaaggccatatttaaaacaa 239
>BF14_1645_C1
Length = 793
Score = 133 bits (67), Expect = 9e-31
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 234 attcaaaagttaatcccggatcgtgtctcctccattctacacgacactggtagaatatac 293
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 89 attcaaaagttaatcccggatcgtgcctcctccattctacacgacactggcagaatatac 148
Query: 294 tatgcacgtctttgcacggatgaagtccata 324
| |||||||||| |||||| ||||| |||||
Sbjct: 149 tgtgcacgtcttggcacgggtgaaggccata 179
>BF01051A1D12
Length = 812
Score = 99.6 bits (50), Expect = 1e-20
Identities = 117/138 (84%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 182 tactagcaaagttcctaattgtgacttcac-cgaggctattaaattttatttcattcaaa 240
||||| |||||||||| |||||| || || ||| ||| |||||||||||| |||| |
Sbjct: 147 tactaccaaagttcctgattgtgtctccagtcgaagctgttaaattttattccatttcta 206
Query: 241 agttaatcccggatcgtgtctcctccattctacacgacactggtagaatatactatgcac 300
||||||||||||||||||||| || || |||||||||||||| |||||| ||| | |||
Sbjct: 207 agttaatcccggatcgtgtctaatctatgctacacgacactggcagaatagactgtacac 266
Query: 301 gtctttgcacggatgaag 318
||| ||||||||||||||
Sbjct: 267 gtccttgcacggatgaag 284
>BF14_3240_C1
Length = 2110
Score = 99.6 bits (50), Expect = 1e-20
Identities = 94/108 (87%), Gaps = 3/108 (2%)
Strand = Plus / Plus
Query: 219 attaaattttatttcattcaaaagttaatcccggatcgtgtctcctccattctacacgac 278
||||||||||||||||| ||||||| |||||||||||| | | ||||||||||||| |
Sbjct: 1569 attaaattttatttcatacaaaagtcaatcccggatcgcg---catccattctacacggc 1625
Query: 279 actggtagaatatactatgcacgtctttgcacggatgaagtccatatt 326
||||| ||||||||| ||||| ||| ||||||||||||| |||||||
Sbjct: 1626 actggcggaatatactgtgcacttctctgcacggatgaaggccatatt 1673
>BF14_1695_C1
Length = 1407
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 261 tcctccattctacacgacactggtagaatatactatgcacgtctttgcacggatgaagtc 320
|||| ||||||||| |||||||| |||||||||| |||||||||||||||||||||| |
Sbjct: 1173 tccttcattctacatgacactggcagaatatactgtgcacgtctttgcacggatgaatgc 1232
Query: 321 catattttaaa 331
|||||| ||||
Sbjct: 1233 catattataaa 1243
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,274
Number of extensions: 8587
Number of successful extensions: 8587
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 8583
Number of HSP's successfully gapped: 6
Length of query: 1522
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1505
Effective length of database: 8,119,229
Effective search space: 12219439645
Effective search space used: 12219439645
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)