BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14300 (UTR included)
(3319 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046B1D08 1346 0.0
>BF01046B1D08
Length = 719
Score = 1346 bits (679), Expect = 0.0
Identities = 700/708 (98%)
Strand = Plus / Plus
Query: 361 taatactagacgatatcagtaataatttattgcttccgaaatattatttctaatttataa 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 taatactagacgatattagtaataatttattgcttccgaaatattatttctaatttataa 71
Query: 421 ttattattctaagattctcattgtgtactttaaataatttattatttcaactattataat 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 72 ttattattctaagattctcattgtatactttaaataatttattatttcaactattataat 131
Query: 481 tcttagcatatttatttaatatgtctgatgatgaggttatacgttttgaaatcaccgact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tcttagcatatttatttaatatgtctgatgatgaggttatacgttttgaaatcaccgact 191
Query: 541 acgatttggataatgaattcaatcccaacagaagtcggagggctaagaaggaacaccaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 acgatttggataatgaattcaatcccaacagaagtcggagggctaagaaggaacaccaaa 251
Query: 601 tatacggtgtttggtcgaaagatagtgatgacgaggaaaatgaagacaatataaggcgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tatacggtgtttggtcgaaagatagtgatgacgaggaaaatgaagacaatataaggcgac 311
Query: 661 gtatacgtaaaccgaaagatttttcagctccaatagattttgtaactggtggagtgcagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtatacgtaaaccgaaagatttttcagctccaatagattttgtaactggtggagtgcagc 371
Query: 721 aggccggcaagaagaaggatgaaaagcaagacatacaaaaatcggagtcgtctacatctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aggccggcaagaagaaggatgaaaagcaagacatacaaaaatcggagtcgtctacatctc 431
Query: 781 gtcccaaatttgcggatagttctgatgatgaagttttggaaccggaagcgcgggagactg 840
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 432 gtcccaaatttgcggatagttctgatgatgaagttttggaaccggaggcgcgggagactg 491
Query: 841 cggggataagaaaagccggacagggtttgagatctggacaaaatttaggtggagttggtg 900
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 492 cggggataagaaaagccggacagggtttgagatctggacaaaatttgggtggagttggtg 551
Query: 901 cttgggagagacatactaaaggcattggagctaaattattattacagatggggtatcaac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cttgggagagacatactaaaggcattggagctaaattattattacagatggggtatcaac 611
Query: 961 ctggtaagggtttgggtaaagagctgcaaggtatctccgctcccgtagaagctacagtca 1020
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ctggtaagggtttaggtaaagagctgcaaggtatctccgctcccgtagaagctacagtca 671
Query: 1021 ggaagggcagaggtgctattggggcatatggacctgaaaaggctgcgc 1068
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 672 ggaagggcagnnntgctattggggcatatggacctgaaaaggctgcgc 719
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 337,860
Number of extensions: 6670
Number of successful extensions: 6670
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6670
Number of HSP's successfully gapped: 1
Length of query: 3319
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3301
Effective length of database: 8,109,745
Effective search space: 26770268245
Effective search space used: 26770268245
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)