BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17372 (UTR included)
(3892 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_712_C1 1421 0.0
>BF14_712_C1
Length = 1286
Score = 1421 bits (717), Expect = 0.0
Identities = 750/761 (98%), Gaps = 5/761 (0%)
Strand = Plus / Plus
Query: 3137 caacgacgtctgcgcttaccaggctgtcggcattcctatcgtgagaatattcacaataaa 3196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacgacgtctgcgcttaccaggctgtcggcattcctatcgtgagaatattcacaataaa 60
Query: 3197 ctacaagggtgaactcaaacacgagttgactcagacattccaatcgacgtactcgcacat 3256
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 ctacaagggtgaactcaaacacgagttgactcagacattccaatcgacgtactcccacat 120
Query: 3257 gtctgtgctagtggaccaggtgttcccgcccgcgctttgtgaacccagcgatgaattctc 3316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtctgtgctagtggaccaggtgttcccgcccgcgctttgtgaacccagcgatgaattctc 180
Query: 3317 tcagagcgtcttctggcgcgaaccgctgcccactgttgaacttcccgccgccgtgctacc 3376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcagagcgtcttctggcgcgaaccgctgcccactgttgaacttcccgccgccgtgctacc 240
Query: 3377 accgacaaaacattagttcgccaatcttatgccgctataaaaatagcccaccaaaatcaa 3436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accgacaaaacattagttcgccaatcttatgccgctataaaaatagcccaccaaaatcaa 300
Query: 3437 ccaatagcataccgcctttgaaatcttatttaccaatcgtgtcccgtcacttgaatgact 3496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaatagcataccgcctttgaaatcttatttaccaatcgtgtcccgtcacttgaatgact 360
Query: 3497 gtatggttttagtgtaatggcggtaaatattttaaaggacctaataatttacagatattt 3556
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 361 gtatggttttagtgtaatggcggttaatattttaaaggacctaataatttacagatattt 420
Query: 3557 agtataatgcttaactcaatttgtcttgtttatcctgtaatgtaatgctaacgtgtagtt 3616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtataatgcttaactcaatttgtcttgtttatcctgtaatgtaatgctaacgtgtagtt 480
Query: 3617 tgaatttatatcaataagtctcactatcgccatatgcaatacaccattattttttttgta 3676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaatttatatcaataagtctcactatcgccatatgcaatacaccattattttttttgta 540
Query: 3677 gaaaagattatttgataaatttcaaaatctaagctcattttaggtaagcaattgcatttg 3736
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 541 gaaaagattatttgataaatttcaaaatctaagctcattttagataagcaattgcatttg 600
Query: 3737 ttttttctttatattacggtgtagtgtcttatacgtaaagttttaaaaattaagtagttg 3796
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttttttctttatattatggtgtagtgtcttatacgtaaagttttaaaaattaagtagttg 660
Query: 3797 ggtgtgcgaaatgtgtgtaatgagaaaaaaaaaca-----caatttaaatacagcttttg 3851
||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 661 ggtgtgcgaaatgtgtgtaatgagaaaaaaaaaaaacaatcaatttaaatacagcttctg 720
Query: 3852 taatactcaaggctttgactataacacttttaacttacatg 3892
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taatactcaaggctttgactataacacttttaacttacatg 761
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 374,486
Number of extensions: 6534
Number of successful extensions: 6534
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6534
Number of HSP's successfully gapped: 1
Length of query: 3892
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3874
Effective length of database: 8,109,745
Effective search space: 31417152130
Effective search space used: 31417152130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)