BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN01542 (UTR included)
         (8617 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01020B1C01                                                           72   2e-11
BF01033A1F05                                                           70   6e-11
BF14_1626_C1                                                           70   6e-11

>BF01020B1C01
          Length = 602

 Score = 71.9 bits (36), Expect = 2e-11
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 29  tatatatatatatatatatatatgtatatatatatg 64
           ||||||||||||||||||||||||||||||||||||
Sbjct: 558 tatatatatatatatatatatatgtatatatatatg 593


>BF01033A1F05
          Length = 770

 Score = 69.9 bits (35), Expect = 6e-11
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 29  tatatatatatatatatatatatgtatatatatat 63
           |||||||||||||||||||||||||||||||||||
Sbjct: 483 tatatatatatatatatatatatgtatatatatat 517


>BF14_1626_C1
          Length = 705

 Score = 69.9 bits (35), Expect = 6e-11
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                              
Query: 29  tatatatatatatatatatatatgtatatatatat 63
           |||||||||||||||||||||||||||||||||||
Sbjct: 691 tatatatatatatatatatatatgtatatatatat 657


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 159,643
Number of extensions: 22687
Number of successful extensions: 22687
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 22685
Number of HSP's successfully gapped: 3
Length of query: 8617
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8599
Effective length of database: 8,109,745
Effective search space: 69735697255
Effective search space used: 69735697255
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)