BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN08476 (UTR included)
         (1229 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01062A2D04                                                          180   3e-45
BF01039A2C03                                                           92   2e-18

>BF01062A2D04
          Length = 342

 Score =  180 bits (91), Expect = 3e-45
 Identities = 97/99 (97%)
 Strand = Plus / Plus

                                                                       
Query: 787 ttttattaaagacgaagaggaacaggctgtggatggacgggttcactgcggaccagctgt 846
           |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 23  tttttttaaagacgaagaggaacagactgtggatggacgggttcactgcggaccagctgt 82

                                                  
Query: 847 gtgctggagaactgaggggcggcaaggacacctgtcagg 885
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 83  gtgctggagaactgaggggcggcaaggacacctgtcagg 121


>BF01039A2C03
          Length = 818

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 113/134 (84%), Gaps = 1/134 (0%)
 Strand = Plus / Minus

                                                                        
Query: 952  ttcaggcttcattctcaatgttcagcgttacttccagtaatgtcctacagaatggctgaa 1011
            ||||| ||||||| | |||||||||| || ||||||||||||||||||| ||||||| | 
Sbjct: 288  ttcagtcttcatttttaatgttcagcatttcttccagtaatgtcctacaaaatggctaag 229

                                                                        
Query: 1012 gacagtaataatag-ctacaaataaaagttgatacacaaatgttgccataacaaaattac 1070
            | ||||| | ||||  | |||||| ||||| ||||  |||||||||| | ||||||||||
Sbjct: 228  gtcagtatttatagttttcaaatacaagttcatacttaaatgttgcccttacaaaattac 169

                          
Query: 1071 aatggttcagtatt 1084
            |||||| |||||||
Sbjct: 168  aatggtacagtatt 155


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 162,715
Number of extensions: 3541
Number of successful extensions: 3541
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3540
Number of HSP's successfully gapped: 2
Length of query: 1229
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1212
Effective length of database: 8,119,229
Effective search space: 9840505548
Effective search space used: 9840505548
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)